Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00069 ATGATTATTGATATTGATGTTCTTACTTTGATTTTGTTAAGGAAGATGGCATCATCAAGTTGTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGATTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTCCACAAGATCTTTGGGGCAAGCAATGTCACAAAGCTGCTCAATGAGCTTCTGCCTCACCAAAGAGAGGATGCAGTGAATTCTCTTGCCTACGAGGCCGAGGCTCGAGTCCGAGACCCGGTCTACGGTTGCATTGGAGCCATCTCCTTCCTCCAAAGGCAAATCCATAGGCTCCAAAAGGAACTCGACGCTGCGAATGTCGACCTAATTCGGTACGCATGCAACGAGATCCCTGATGGCGGAGCGAGTCATGTGGTTCAGCCAATCCCCGACCTACGCCCGAGGGCTTTGGATCAGTATCATACAAGAATTCTTGGGAATGAAGGGTCATCAAGTGGATATTATAATCAACATCCTCCTGCTTTCCCTATGGGCTATCCACTTCCTTGGAATGAAAACTCTTCTGGAACTAACATCAATGAAGGAGGAAGGGATGACAATATTTGA 615 46.02 MIIDIDVLTLILLRKMASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPDGGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGTNINEGGRDDNI 204
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 374319 374933 + Carg20207-RA Car11g00069 156022
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g00069 204 Pfam Lateral organ boundaries (LOB) domain 25 121 IPR004883 -
Car11g00069 204 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Car11g00069 204 Coils Coil 104 124 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00698 Car-Chr5:4724611 Car11g00069 Car-Chr11:374319 1.66E-58 dispersed
Car11g00069 Car-Chr11:374319 Car02g00516 Car-Chr2:4069449 2.78E-48 dispersed
Car10g00093 Car-Chr10:418205 Car11g00069 Car-Chr11:374319 9.95E-118 wgd
Car11g00069 Car-Chr11:374319 Car11g01357 Car-Chr11:11112461 1.72E-69 wgd
Car11g00069 Car-Chr11:374319 Car13g00709 Car-Chr13:8335544 3.65E-63 wgd
Car11g00069 Car-Chr11:374319 Car14g00607 Car-Chr14:3379792 4.37E-71 wgd
Car11g00069 Car-Chr11:374319 Car18g00177 Car-Chr18:974033 7.70E-59 wgd
Car11g00069 Car-Chr11:374319 Car04g02589 Car-Chr4:20334234 2.66E-63 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4221 PF03195 LOB 7.00E-42 No_clan Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00069 - - cmos:111438177 405.986