Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00101 | ATGAAGGACAACAATGATGGGTTTGTGCGAGCGGATCAGATTGATCTCAAGAGCTTGGATGAGCAGCTTGAGAGGCATCTCAACAGAGCCTTGACGATGGAGAAGAACAAAAAGAAAGATGAAGATGGTAACAGCTTTCTCACTTCCGCTGCCATGGCTCGCAGTAGGTCTACTAAAGTCGCTGCTAAGGAGCGGCTGGAGTGGGAGATCGATCCGTCCAAACTGATAATCAAGAGCGTCATTGCTCGTGGTACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTAGATGTCGCCGTTGTTTGCTACCGTCCTCTGAAGTTTTCTGTTGGCTTTTTTAATGCATTAGTCAAGATGCTGGATTGGGGAGAAGAGGGTCACAGGACAGAAGCTGAAATTTCTTCACTAAGGGCAGCTTTCAAACAGGAAGTTGCTGTTTGGCATAAACTCGAGCATCCCAATGTTACTAAGTTTATAGGAGCAACAATGGGCTCAGCGGAGTTACAGATCCAAACTGAAAATGGTCTAATAGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTCGCTGGAGGTGCCCTAAAATCTTATCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGTTGGCACTTGATCTTGCTAGAGGGTACCCCTGCACCACTATTCCTATCCCTTCTGTTCGCTAA | 711 | 46.98 | MKDNNDGFVRADQIDLKSLDEQLERHLNRALTMEKNKKKDEDGNSFLTSAAMARSRSTKVAAKERLEWEIDPSKLIIKSVIARGTFGTVHRGVYDGLDVAVVCYRPLKFSVGFFNALVKMLDWGEEGHRTEAEISSLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGYPCTTIPIPSVR | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 579938 | 582577 | + | Carg18137-RA | Car11g00101 | 156054 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00101 | 236 | Coils | Coil | 16 | 36 | - | - | |
Car11g00101 | 236 | ProSiteProfiles | Protein kinase domain profile. | 75 | 236 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g00101 | 236 | Pfam | Protein tyrosine and serine/threonine kinase | 77 | 224 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00123 | Car11g00101 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00101 | Car-Chr11:579938 | Car06g01199 | Car-Chr6:8767005 | 8.30E-66 | dispersed | |
Car10g00123 | Car-Chr10:582369 | Car11g00101 | Car-Chr11:579938 | 4.97E-148 | wgd | |
Car11g00101 | Car-Chr11:579938 | Car11g01379 | Car-Chr11:11265175 | 1.84E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89156 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-11 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00101 | - | - | csv:101209182 | 380.948 |