Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00101 ATGAAGGACAACAATGATGGGTTTGTGCGAGCGGATCAGATTGATCTCAAGAGCTTGGATGAGCAGCTTGAGAGGCATCTCAACAGAGCCTTGACGATGGAGAAGAACAAAAAGAAAGATGAAGATGGTAACAGCTTTCTCACTTCCGCTGCCATGGCTCGCAGTAGGTCTACTAAAGTCGCTGCTAAGGAGCGGCTGGAGTGGGAGATCGATCCGTCCAAACTGATAATCAAGAGCGTCATTGCTCGTGGTACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTAGATGTCGCCGTTGTTTGCTACCGTCCTCTGAAGTTTTCTGTTGGCTTTTTTAATGCATTAGTCAAGATGCTGGATTGGGGAGAAGAGGGTCACAGGACAGAAGCTGAAATTTCTTCACTAAGGGCAGCTTTCAAACAGGAAGTTGCTGTTTGGCATAAACTCGAGCATCCCAATGTTACTAAGTTTATAGGAGCAACAATGGGCTCAGCGGAGTTACAGATCCAAACTGAAAATGGTCTAATAGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTCGCTGGAGGTGCCCTAAAATCTTATCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGTTGGCACTTGATCTTGCTAGAGGGTACCCCTGCACCACTATTCCTATCCCTTCTGTTCGCTAA 711 46.98 MKDNNDGFVRADQIDLKSLDEQLERHLNRALTMEKNKKKDEDGNSFLTSAAMARSRSTKVAAKERLEWEIDPSKLIIKSVIARGTFGTVHRGVYDGLDVAVVCYRPLKFSVGFFNALVKMLDWGEEGHRTEAEISSLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGYPCTTIPIPSVR 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 579938 582577 + Carg18137-RA Car11g00101 156054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00101 236 Coils Coil 16 36 - -
Car11g00101 236 ProSiteProfiles Protein kinase domain profile. 75 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00101 236 Pfam Protein tyrosine and serine/threonine kinase 77 224 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00123 Car11g00101 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00101 Car-Chr11:579938 Car06g01199 Car-Chr6:8767005 8.30E-66 dispersed
Car10g00123 Car-Chr10:582369 Car11g00101 Car-Chr11:579938 4.97E-148 wgd
Car11g00101 Car-Chr11:579938 Car11g01379 Car-Chr11:11265175 1.84E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89156 PF07714 PK_Tyr_Ser-Thr 1.80E-11 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00101 - - csv:101209182 380.948