Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00104 | ATGAAACTATACACCGAGGCCACCGATGGCTCGTCCATAGAGCCCAAGGACAGTGCCTTAGTATGGCATCATCGAGACGCCGATCCATGTTTCGGTTCATGTCAGGCCATGGAGCTCTTAGATCACCTTGAAAATGTTCTTGCTAACGAACCCGTAGTCGTCAAAAGAGGCCACCAGATCGTCGAAGTGAAACCACAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACTATGATCGCCTCTGATAAGGCGCCCGACTTTGTGATGTGCATCGGAGACGATCGATCCGATGAAGACATGTTCGAAAGCATATCATGTACAACCTATAGCTCATCCCTTGCTGTTCCTCCAAAGATATTTGCCTGTACTGTGGGGCAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCACCGACGTTTTGACCGTACTTCAAAGCCTGGCCACCTCTACTAGCGGTAAACTGAGGTCAGAAGAGCCTCCTTCTTGTGAAGCGGATAAATCCAATTCTCTGTTGCCCACCACCAGCTGCGGTTGTTCTCGGCTATCGTGCTTCGGATCTCGCCGAACAGCCGCCGGCGGGCCGTCATGGTGGGAGCGGATTAGGGCGTCGGAGGTTCACAACGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTCTTTTGAAGCTCCGAGAGTGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATAGAAGTGGTGCTACTGCTGCTGCTAGGCCTGGAAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTCGACGAAGGCTCGGGGCAGATAGGGGAATTGGACGACGATATCGATGATTTCAGTGGATTTCGAAACTTCTCTGCTCGCTACGCTTCGATTCCGGGGTCGTTGAAGACTGCAGGAACCACTGTTTTGGGGAAGGATGCTCCTACCGTCGAGTAA | 972 | 51.23 | MKLYTEATDGSSIEPKDSALVWHHRDADPCFGSCQAMELLDHLENVLANEPVVVKRGHQIVEVKPQGVTKGLVAERVLSTMIASDKAPDFVMCIGDDRSDEDMFESISCTTYSSSLAVPPKIFACTVGQKPSKAKYYLDDTTDVLTVLQSLATSTSGKLRSEEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIGELDDDIDDFSGFRNFSARYASIPGSLKTAGTTVLGKDAPTVE | 323 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 595269 | 597706 | + | Carg18140-RA | Car11g00104 | 156057 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00104 | 323 | Pfam | Trehalose-phosphatase | 1 | 141 | IPR003337 | GO:0003824|GO:0005992 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car11g00104 | Car13g00740 | CCT | |
| Car11g00104 | Car18g00150 | CCT | |
| Car11g00104 | Car13g00740 | ECH | |
| Car11g00104 | Car18g00150 | ECH | |
| Car10g00128 | Car11g00104 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01747 | Car-Chr4:10022884 | Car11g00104 | Car-Chr11:595269 | 1.29E-75 | dispersed | |
| Car09g00534 | Car-Chr9:3012880 | Car11g00104 | Car-Chr11:595269 | 1.41E-06 | dispersed | |
| Car10g00128 | Car-Chr10:606794 | Car11g00104 | Car-Chr11:595269 | 1.17E-89 | dispersed | |
| Car11g00104 | Car-Chr11:595269 | Car19g00792 | Car-Chr19:8586811 | 3.73E-70 | dispersed | |
| Car12g00334 | Car-Chr12:2113330 | Car11g00104 | Car-Chr11:595269 | 3.02E-06 | dispersed | |
| Car18g00415 | Car-Chr18:2600958 | Car11g00104 | Car-Chr11:595269 | 6.78E-12 | dispersed | |
| Car10g00127 | Car-Chr10:601967 | Car11g00104 | Car-Chr11:595269 | 2.69E-87 | wgd | |
| Car11g00104 | Car-Chr11:595269 | Car13g00740 | Car-Chr13:8468553 | 2.59E-47 | wgd | |
| Car11g00104 | Car-Chr11:595269 | Car18g00150 | Car-Chr18:815798 | 1.67E-38 | wgd | |
| Car11g00104 | Car-Chr11:595269 | Car04g02623 | Car-Chr4:20474315 | 1.62E-30 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00104 | K16055 | - | csv:101209676 | 284.263 |