Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00113 ATGTTGGTCTTTTTAGTTCATTGTAATCTTCGGCAATACCACCGCTTCATCCCGTGTCTGTATGTCTTCTTGCCTCCTATGTCGTCGCAGAAAAGAAACCCAGATGATGGAGATGCTCCGGCGGATGGTGACAATCCCGATGATAAGCGTAGGAAGTTTAGTTTCTTTCGTGTGGTTCAGGATGCTTTGTTCTCGCAATCAATGCAAAAGTTATTGGAGCCACTCATACGTAAAGTGGTAAAGGAGGAGGTTGAATTGGCACTAAGAAAGCATATGACCAATGTGCAAAGGAATGATGAAAATGGAGGGAAAGAAATCTGTTCTTCCGAGCCAAGATGCTTTCAATTGAAGTTCATAACTGATATATCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCGACTTGAAGGTGGCTTTGATTGATACCCAAAGTGGGAAAATTGTTGACACTGAGCCACAATCCTCAGCCAAAGTGGAAATTGTAGTGCTGGAGGGTGATTTTGAGAGTGGAGTTGATAATTACACTATAGAAGAGTTTAAGAACAACATTGTTAGAGAAAGGGAAGGAAAGAAATCACTTCTTACAGGAGATACATTTGTGAACCTCAAAGATGGCATTGGTTTGTTAGGTGAGATTTCTTTCACTGATAATTCTAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTTTGGACAACAATAATGAAACGAGAATACTAGAAGCGAAGACTGCATCATTCGTGGTCAGGGATCACCGTGGCGAATTGTACAAGAAGCACCATCCTCCATCTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGATGGAGCGTATCATAAGCGCCTGAGCCAAGAAAAAATCAAGACGGTGCAAGATTTCCTAAGTCAACTTTATGTACAACCTTCAAGGCTTCGTAATATTCTTGGTGGCATGCCTACCAAAATGTGGGAAGCTACAATTGAGCATGCGCAGACATGTGTGCTCAATAAGAAGATTTATGTGTACAAACCTCACGATTTGGAACCGAAAAGCGGAGTGGTCTTTAATGTTGCTGATGCTCACAACTTGGTTATCTCCGCATACGAACACTGGGAACAGGTTGATTCTATGGATGATGAAACTTCTCTTGTAGGTAGCTCTTCTCAGTTCCTTTACACCCCGAGCTCACCGATGGTGGACCATTCTTATGGTATCAAGTATTTGGCTTCTCCAAAATTTAGTGGCTTTGATTTCACACCATCCAATGCCTATTCTTCTGACATAATTTCATCGATGGGATCTATTGAGAATGTGAGTGGTTTGGACGATCATGCTTTGCAGGCTTTTGATTCCATGGTAGTAAGACATGATCAGATTCCATGTTCCCCAAACTATCCCAGCTCTTCCTTGATCTGTGATTCCGAGCCGCTAAATTCATCTTTCTTCGATGTGGATCATATGCAAGTTTTAGAGTCTGCTGGTTTCCAATGTAGCTCGATTTTAGAATCACGAGCTACTCCAAAAGGTGTTGCACAAACTAGATGGACTAAGGGCTATGCAGTTTTTTCTAGGTGCCTTGCTGTGCCCGTATCTGAGCCAGAAGAATTTTCTCCCTGA 1626 42.62 MLVFLVHCNLRQYHRFIPCLYVFLPPMSSQKRNPDDGDAPADGDNPDDKRRKFSFFRVVQDALFSQSMQKLLEPLIRKVVKEEVELALRKHMTNVQRNDENGGKEICSSEPRCFQLKFITDISLPVFTGARIEGRDGSDLKVALIDTQSGKIVDTEPQSSAKVEIVVLEGDFESGVDNYTIEEFKNNIVREREGKKSLLTGDTFVNLKDGIGLLGEISFTDNSSWTRSRRFRLGARILDNNNETRILEAKTASFVVRDHRGELYKKHHPPSLQDEVWRLQKISKDGAYHKRLSQEKIKTVQDFLSQLYVQPSRLRNILGGMPTKMWEATIEHAQTCVLNKKIYVYKPHDLEPKSGVVFNVADAHNLVISAYEHWEQVDSMDDETSLVGSSSQFLYTPSSPMVDHSYGIKYLASPKFSGFDFTPSNAYSSDIISSMGSIENVSGLDDHALQAFDSMVVRHDQIPCSPNYPSSSLICDSEPLNSSFFDVDHMQVLESAGFQCSSILESRATPKGVAQTRWTKGYAVFSRCLAVPVSEPEEFSP 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 646407 649854 - Carg18150-RA Car11g00113 156066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00113 541 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
Car11g00113 541 Pfam Calmodulin binding protein central domain 271 336 IPR046830 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00138 Car11g00113 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g01007 Car-Chr10:9791148 Car11g00113 Car-Chr11:646407 4.09E-52 dispersed
Car11g00113 Car-Chr11:646407 Car11g00373 Car-Chr11:2042077 1.56E-93 dispersed
Car10g00138 Car-Chr10:652509 Car11g00113 Car-Chr11:646407 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00113 - - csv:101211405 806.979