Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00126 ATGGATCCTCCACTCGTCAATGAATCTTCCTTCTCCGCTGCCAATCCTTCTGCTTACAGCTTGGCCGCGATTTGGCCTTTCGGGGGGGAGCAGGGTGGGAGCACATTGGGACTTCGAATGGCTAATTTGGGTCAGATTCTTGGTGGCTTCCCAGAGAGCTCCACGAATCGCGATGGATCAATGGAGGAATCCACAGTGACGGAGCAGAGTGGCGGTGGGAGGAAGAGGAAGGATGTGAGCTCCGAGGATGAATCTTCCAGAATGGTTTCCACTAGTAGTGCGAATCAATTGAATAACTCAAAGGGTAAACGGATGAAAGTAGTGGAATCCAGGGATGAAAATGGTGATATAAAAGCTGAAGTGGAATCTAGCTCAGGAGATGGTAAGAAGGCGGCTGAGCAAAGCCCGAAACCTTCTGAACCACCAAAAGATTACATCCATGTGAGAGCGAGAAGGGGCCAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGCAAGAAGAGAGAAGATCAGTGAGAGAATGAAAATGTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTCATTGGAAAAGCACTTGTCCTTGATGAGATAATAAATTATATCCAATCATTGCAACGTCAGGTCGAGTTCCTCTCCATGAAGCTTGAAACTGTGAATTCCAGGATGAACATAAGCCCTGGCATTGAAGGTTTTACCACAAAAAATATTGTTAATCAACCATATGATGCAGCAGCTGGAATATTATATGGTTCACAAACAGCAAGAGAATATAGCCAAGGTGCACAACCTGAATGGTTGCATATGCAGATCGGTGGAAGTTTTGAAAGAACATCTTAG 837 45.4 MDPPLVNESSFSAANPSAYSLAAIWPFGGEQGGSTLGLRMANLGQILGGFPESSTNRDGSMEESTVTEQSGGGRKRKDVSSEDESSRMVSTSSANQLNNSKGKRMKVVESRDENGDIKAEVESSSGDGKKAAEQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKMLQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRMNISPGIEGFTTKNIVNQPYDAAAGILYGSQTAREYSQGAQPEWLHMQIGGSFERTS 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 713031 715998 - Carg18163-RA Car11g00126 156079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00126 278 MobiDBLite consensus disorder prediction 85 103 - -
Car11g00126 278 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Car11g00126 278 Coils Coil 201 221 - -
Car11g00126 278 MobiDBLite consensus disorder prediction 69 84 - -
Car11g00126 278 MobiDBLite consensus disorder prediction 46 144 - -
Car11g00126 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Car11g00126 278 MobiDBLite consensus disorder prediction 48 68 - -
Car11g00126 278 MobiDBLite consensus disorder prediction 104 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00154 Car11g00126 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00834 Car-Chr5:8227632 Car11g00126 Car-Chr11:713031 1.81E-92 dispersed
Car11g00126 Car-Chr11:713031 Car12g00674 Car-Chr12:4633152 6.66E-91 dispersed
Car10g00154 Car-Chr10:742369 Car11g00126 Car-Chr11:713031 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4227 PF00010 HLH 3.60E-08 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00126 - - csv:101215588 486.493