Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00139 | ATGGAGGCTCAACCTTTGCCAACCACAGCTGATGCAGTTCAATCAGCTGGAGAAGATGAAGAACATGCTCCCAAACATAAGGTTCCTTTAATGGCTGAGTTGGAGAAGCCTTCCATGGAGCCCCTCTCACTCGCATCTGCCTCTTCAACTTGGAAGGAAGAGGATCATGAGCATGAACAAAGGCTAAAAATGGCGAAAGGTGAAATGAGGGAAGTGAAGGAAGAAAACCAGCGGCTAAAAAGGTGTTTAGATGAAATGATGAGGGATTACGAGAGCCTGAAAAGGCAATTCCATGATATGAGTACCATAAACAACGAGGCAGCTGAAGAAGTTGAGGACATGGTTTCACTGACATTGGGAAGATCCTCAAGCGACCAAAACAAGAACACTTGCCCTGAAACAAAGCCAGATCTTCAAAACATTCAAAGTCCGGCCGACAGTGAACAAGGCAAGGAGGAAGATGCCGGACAGACTTGGCCGCCGGGTAAAGTGTTGAAGGGGTTGGCTGCGCCGGCGGCCGGAGAAGATGAAGTTTCTCAGCAGAATCCTCCGAAGAAGACGAGGGTTTGTGTGCGGGCTCGGTGTGATACGCCAACGCTGAACGATGGGTGTCAATGGAGAAAATATGGGCAGAAGATTGCTAAAGGAAATCCTTGCCCTCGAGCTTACTATCGCTGCACCGGCGCACCCTCTTGCCCGGTTAGGAAGCAGGTGCAAAGGAGTGTTGATGATATTTCAATACTAATCACTACCTATGAAGGAACTCACAACCATCCTCTACCTGTGTCAGCCATGGCCATGGCTTCAACCACGTCGGCCGCCGCCTCAATGCTCCTCTCGGGTGCTTCCACCTCGACCTCTCGGCCGGGACTAAACCCTTCACCGATCGGGACAGCGTCTGCAAATCTCCATGGAATGAACATGTACACCAATTCAAAGCAATTCTACTTGTCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACCTTAGACCTCACTTCAAATCCTCCCTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTCCTTTCCACAAAATCCCTTCAACTTATCCCCCAAAATATCCCTTCACCAGCCTTGATTTTGGGTCTTGGAATACTAATATCAACAAAAATGTATTAGGAATGTCATCAGATCTTGCTAAGCAATTCCCTCCCCATACTAACATCTACCAAGCTTGCCTTCAACAATTTGCCAAACCTTCAACTCCTCCGCCCCCGCCTCTACCGGACACGATAGCAGCGGCAACCAAGGCAATTACGTCCGACCCGAGTTTCCAATCAGCATTGGCGGCTGCCCTGAGCTCGATCATCGGCGGCGGAAACGGGGGCGAGGCGGTTCAGGCAATGAGTAGCTATGTCCAAGCAGCACAGGGACAAGGAAGTATGGGGTTTCAGGCAGCTCCATCGTTGACATACTCCACATCCAAGAGTCCTTCATCTCCTGGTGACAGTAGAGACGATGATACCAAGTGA | 1515 | 49.31 | MEAQPLPTTADAVQSAGEDEEHAPKHKVPLMAELEKPSMEPLSLASASSTWKEEDHEHEQRLKMAKGEMREVKEENQRLKRCLDEMMRDYESLKRQFHDMSTINNEAAEEVEDMVSLTLGRSSSDQNKNTCPETKPDLQNIQSPADSEQGKEEDAGQTWPPGKVLKGLAAPAAGEDEVSQQNPPKKTRVCVRARCDTPTLNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGASTSTSRPGLNPSPIGTASANLHGMNMYTNSKQFYLSNSSMLSSSLNHPTITLDLTSNPPSASSSSSSSSSSSSPFHKIPSTYPPKYPFTSLDFGSWNTNINKNVLGMSSDLAKQFPPHTNIYQACLQQFAKPSTPPPPPLPDTIAAATKAITSDPSFQSALAAALSSIIGGGNGGEAVQAMSSYVQAAQGQGSMGFQAAPSLTYSTSKSPSSPGDSRDDDTK | 504 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 785975 | 788854 | + | Carg18176-RA | Car11g00139 | 156092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 15 | 33 | - | - | |
Car11g00139 | 504 | Coils | Coil | 55 | 96 | - | - | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 479 | 504 | - | - | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 50 | 76 | - | - | |
Car11g00139 | 504 | Pfam | WRKY DNA -binding domain | 201 | 259 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 120 | 146 | - | - | |
Car11g00139 | 504 | ProSiteProfiles | WRKY domain profile. | 195 | 261 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 334 | 358 | - | - | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 479 | 494 | - | - | |
Car11g00139 | 504 | MobiDBLite | consensus disorder prediction | 120 | 165 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g00139 | Car13g00772 | CCT | |
Car11g00139 | Car13g00772 | ECH | |
Car10g00169 | Car11g00139 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00139 | Car-Chr11:785975 | Car11g01502 | Car-Chr11:12089406 | 2.83E-55 | dispersed | |
Car10g00169 | Car-Chr10:815310 | Car11g00139 | Car-Chr11:785975 | 1.89E-127 | wgd | |
Car11g00139 | Car-Chr11:785975 | Car13g00772 | Car-Chr13:8627371 | 5.28E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4229 | PF03106 | WRKY | 8.70E-24 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00139 | - | - | cmax:111471155 | 893.649 |