Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00157 ATGGCGTTTCTTGGACCTCTCTTGGTGGGTCTTCTACTCTCTTTGGGATGTCATTCTGTTCGTGCCAACAATGGAGGTTGGATTGATGCCCACGCTACGTTCTACGGTGGGGGCGACGCGGCTGGCACAATGGGAGGAGCTTGTGGCTATGGGAACCTGTACAGCCAAGGGTATGGAACGAACACAGCGGCATTAAGCACAGCCCTGTTCAACAATGGGCTGAGTTGTGGTGCTTGCTTTGAAATCAAGTGCGTAAATGATCCAAAATGGTGTCTTCCAAACTCCATTGTTGTCACTGCCACAAACTTCTGCCCACCAAACAATGCACTCCCCAACAACGCCGGCGGCTGGTGCAATCCTCCCCAGCACCATTTCGACCTCTCCCAGCCCGTCTTCCAGCAAATCGCTCAATTCAAAGCAGGCGTCGTCCCAGTGGCTTACAGAAGGGTGTCTTGTCAGAAGAAAGGAGGCATAAGATTCACAATAAACGGCCATTCATACTTCAATTTAGTTCTTGTAACGAACGTTGGTGGAGGTGGGGATGTTCATGGGGTATGGATCAAAGGGTCGAAAACAGGGTGGGAAGCAATGTCGAGGAACTGGGGGCAGAACTGGCAGAGCAATTCATATCTGAATGGACAGAGCCTGTCGTTCAAAGTGATCACCGGCGATGGCCGGACATTGATATCCAATAACGTAGCACCAGCTGGGTGGAGCTTTGGTCAGACTTATAGTGGGCTTCAGTTCCCATGA 753 51.13 MAFLGPLLVGLLLSLGCHSVRANNGGWIDAHATFYGGGDAAGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDPKWCLPNSIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQQIAQFKAGVVPVAYRRVSCQKKGGIRFTINGHSYFNLVLVTNVGGGGDVHGVWIKGSKTGWEAMSRNWGQNWQSNSYLNGQSLSFKVITGDGRTLISNNVAPAGWSFGQTYSGLQFP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 869855 870879 - Carg18194-RA Car11g00157 156110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00157 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Car11g00157 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Car11g00157 250 Pfam Lytic transglycolase 62 147 IPR009009 -
Car11g00157 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00188 Car11g00157 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00157 Car-Chr11:869855 Car15g00262 Car-Chr15:1437362 1.25E-135 dispersed
Car10g00188 Car-Chr10:902985 Car11g00157 Car-Chr11:869855 9.96E-151 wgd
Car11g00157 Car-Chr11:869855 Car18g01051 Car-Chr18:10776371 1.36E-127 wgd
Car11g00157 Car-Chr11:869855 Car04g01707 Car-Chr4:9792612 7.49E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00157 - K20628 csv:101222936 456.062