Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00171 GGGGCGTTGTACGTGCTGAGAGTGTTCGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCGTCTTTCATGGTTTTCAACTTCACAGAAGGTGGTAAGCGAAGTCAAGTTTCTGATGTACTGAGTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATACGAGGGATGTCCTTTATTGCCATTGGAGATGGTTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGCAGGGTCAACAGAATGTGTTATTGATGCATTGTGAAAGGGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGAAAACAGTACAGTGGGGAGCAGAAGACTCTTGACATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTCTTATCTCCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAACTTAGGTTCTGATTGGCCTCCGGCAGATACACCCCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAAGGGTGTAGGCCTGTTGTGCGTGTCTATGGTCAAGACCCCTCAATACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCTATCAACAGAAAACATATCCGAAACTACCAACAGGAAGAGTGTATGCTGGTGAAAGTTGATATTAATTGCCATATTCAAGGGGACGTAGTTGTTGAATGCATCCATTTGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAATATTATAATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCAAGGGACCAGCTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGGTGCTGATGCTGATGTCGTTGTCCCCAATCTTACCACAACCTTTGATGATGAAGATGAAAATGAAGCTGGAGTTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATTTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGATCCAATCATCCTCAATTGATCAATCGTGCAGACCGTAAAGCAGATAGGAAGGAGGACTTTGATCCGCCTGCATTCCAAGATTGTGCAACTGATGATGGAAATCTCAAGCATGTGAAGAAATCAGATTTTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCCAACCTTAATGCTGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCCTGGTTGCTGCTGCTAATGTCTTGACTCATGTGAAAGCCCAGGGGTTGGTAGATGCCGCATATGGAAAAGTTGAAGATAATGAAGAAAAGGATGATGGAAGAGGTGCTGCACCTGCGAGATTGGAAAACAAGGTTCTTCAGAAAAAGTTGAGTGCCGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACAGCCTATTCCAAGTGGAAAACCTACCACTGATATGGTTTCAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGCTTCTAGGTGGATTCCTCCTAACAAAGGCTCTTATATGAACTCTATGCATGTATCCTATCCTCCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCCTGTATTGCACCATCAAAGGATACAAGTGCAAATTCCAAAACAAAGGGTGCTGCCACCCTTGATTCTCTGGTTTCTACATATTTATTTAGTGAACGAAAAGATCAAAAAGTGGATTCTGTAAGGTCTTCACACTCTGCACCTGGGGAACTCATGCATGGCGCACCATCTCCAGTTGAGTCAATTGAGGAAGCAGATTCTTCCTCTGAAACTCCAAAACCATCACAAAGTGATTCACAACTTGAAGTAACACCTCCTCCCCTTCCCACAAAACCTCCATCTCCACATTTACCATCACTCCCCAGGGCAGATGCAATACCTCCTCCACCTCCTCCACCACCCCCATCCTTGCACCATATGGAGTCGACATACTCTGTTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATTGCTAACTCATCAAAGGCAGTGACTCCCCCTCTCCCTCCCCCTCCTCCATTCAGTAGGCAGAACAGTGAGATACTTTTGCCCATTTCTTCTACACAGTCATCATGGGAGCAAAGATATTCTTCTGTTTCTAGTGTAAAGGTGGCTGGTTCTGTACCTCCTCCACCTGCACCCCCATCTCGACCTCGACCTCACTCTGTGGCCATGCCATCTACATTAAAGAATATTGCAAGTATTCCTCGTGTACCTGTTGTATCTCCTCCTTCAGCATTTCTTTCATTGGCATATAAAGGTATATTGCTATCATCACCCCCACCTCCCCCTCTTTCTAGGATACATGAACTACTTGCTCCACCATCTTCACCACACCTGCCTGCTCCAATATGTGGTGGTAAAACACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCCCCACCCCCACCCCCATTAATGCAAAGGGCACTTCCTTCACCATCTCCAGGGGAAGGAACTCCACCCCCACCCACGCATGGTGTATCTCCAACACTACCTTTATTACATGGAGCACCACAGCCTCCCTCACCACCTCCTCCCCCACCACCTTCAAGTTATGGAGCACCTCCTCCTCCACCCCTTCCAATGTTTGGAGCACCCCCTCCTTTGATCCCTCCCATGCAAATGCAGAGGAGACCTCCTACACCTCCTCCATCGCCTCCAATGCATGGGTCTCCTCCACCAATAAATGCAACTCCACCGCCTCCCATACGTGGGGCTTCTCCACCACCCCCACCTCCACTAATGCATGTGGCTCCTCTACCATCGCCACCGCCACCAATGCTTGGGAATCCTCCTCCACCTCCACCTCCACCTCCACCTCCACCAATGCACGGGAATCCTCCACCACCCCTGCCACCTCCACCAATGCATGGTGCTCCTCCACCACCCCCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCCTCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCTACCCCTCCACCAATGTGTGGGGCTCCTCCACCCCCACCGCCACCCTCAGCCGGGGATGGTGGAGCCCCTCCACCACCTCCGCCACCCGGGGGTGGTGGAGTCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCTGCACCCCCTCCTCCGCCAGGTGGTCATGCTCCAGCCCCACCTGGACCTCCAGGTGGTGGACCTCCTCCACCTCCACCGCTAGGTTCAAAAGGAGGAGCTGTTGCACCTCCTGACCCAAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTAACACGCTCAGCTACTACTGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAGGTTACAAGAGCTCTGCAAGGGAGCTTATGGGAAGAACTACAGAGATATGGCGAGACTCAAATGTATTTTGAATTCTCTTTTTATGTATCTTGCCGATTTGAATTGAAATTAATCCAGTCTTCCAAGAGGATATTTCTCAGTACTTTTAATGATTTTATGCTGTTTGCTTCTTATTGGTGCTTCCTTTTCCTCCCTCTCCTCAGTGCATCAGAGTTTGATGTGACCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCTGATGGAGGCAAATCTCGAAGGAAGTCTGCTGGATCCAAAACTGACAAAGTTCATCTGATTGACCTCAGAAGAGCTAACAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGGGTAGAGTCGAAGATGAAAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGTTATCAGAATTTAAGAAGAGTTTGAATACTGTCAACTCGGCTTGTCACGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACGGCGAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCAGCTCTTCTTAAATTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCGGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAATTTGTTGCTTCTGAAAATGATGGCCCAGTCTCCGAAATTTTTCGAAAGACGTTGAAAGAATTCATTGCTACTGCTGAGACAGAGGCGGCGTCGGTGACAAATCTGTACTCTGTTGTGGGTAGAAATGCAGACGCACTTGCATTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTATAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAATCCGATAAGGATGCTGAAATGGAGAATGCCAAAGGAATTAAATAG 4851 47.5 GALYVLRVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFTEGGKRSQVSDVLSQYDMTVMDYPRQYEGCPLLPLEMVHHFLRSSESWLSLQGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLDMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPADTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSIPANRTSKLLFSTSINRKHIRNYQQEECMLVKVDINCHIQGDVVVECIHLDEDLVHEEMMFRVMFHTTFVRSNIIMLNRDEVDVLWDARDQLPKDFRVEALFLGADADVVVPNLTTTFDDEDENEAGVASPEEFFEVEEIFSNAMDGQEAKGSNHPQLINRADRKADRKEDFDPPAFQDCATDDGNLKHVKKSDFDAVKDIAVDDVKYKLDENIYSNLNAVKDIAVDDGDMNSNSFLVAAANVLTHVKAQGLVDAAYGKVEDNEEKDDGRGAAPARLENKVLQKKLSADGSRQKSEKLQTPIPKKQPIPSGKPTTDMVSAKQKVKQQETQGFSAKQAKPNAASRWIPPNKGSYMNSMHVSYPPSRYNSAPAALACIAPSKDTSANSKTKGAATLDSLVSTYLFSERKDQKVDSVRSSHSAPGELMHGAPSPVESIEEADSSSETPKPSQSDSQLEVTPPPLPTKPPSPHLPSLPRADAIPPPPPPPPPSLHHMESTYSVPPLSVSLAPPPIANSSKAVTPPLPPPPPFSRQNSEILLPISSTQSSWEQRYSSVSSVKVAGSVPPPPAPPSRPRPHSVAMPSTLKNIASIPRVPVVSPPSAFLSLAYKGILLSSPPPPPLSRIHELLAPPSSPHLPAPICGGKTPPPITSVHSAPPPPPPPPLMQRALPSPSPGEGTPPPPTHGVSPTLPLLHGAPQPPSPPPPPPPSSYGAPPPPPLPMFGAPPPLIPPMQMQRRPPTPPPSPPMHGSPPPINATPPPPIRGASPPPPPPLMHVAPLPSPPPPMLGNPPPPPPPPPPPPMHGNPPPPLPPPPMHGAPPPPPPPPPMHGNPPPPSPPPPMHGNPPPPTPPPMCGAPPPPPPPSAGDGGAPPPPPPPGGGGVPAPPPPPWGGGAPAPPPPPWGGGAPPPPPPPGGGGAPPPPPPPGGGGAPAPPPPPGGHAPAPPGPPGGGPPPPPPLGSKGGAVAPPDPRGLSAGRGRGLTRSATTAPRRSSLKPLHWSKVTRALQGSLWEELQRYGETQMYFEFSFYVSCRFELKLIQSSKRIFLSTFNDFMLFASYWCFLFLPLLSASEFDVTEIETLFSATVPKPADGGKSRRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMGYTGDKDNLGKCEQYFLELMKVPRVESKMKVFSFKIQFGSQLSEFKKSLNTVNSACHEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLKFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFVASENDGPVSEIFRKTLKEFIATAETEAASVTNLYSVVGRNADALALYFGEDPARCPFEQVIVTLLNFMRLFRKAHEENCKQAELEKKKSDKDAEMENAKGIK 1616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 942519 957111 - Carg18208-RA Car11g00171 156124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00171 1616 MobiDBLite consensus disorder prediction 529 554 - -
Car11g00171 1616 Pfam C2 domain of PTEN tumour-suppressor protein 183 319 IPR014020 -
Car11g00171 1616 MobiDBLite consensus disorder prediction 621 796 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 675 708 - -
Car11g00171 1616 Coils Coil 1586 1606 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 847 1178 - -
Car11g00171 1616 Coils Coil 1492 1512 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 501 564 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 750 775 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 731 748 - -
Car11g00171 1616 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1199 1611 IPR015425 -
Car11g00171 1616 MobiDBLite consensus disorder prediction 713 729 - -
Car11g00171 1616 Pfam Formin Homology 2 Domain 1203 1348 IPR015425 -
Car11g00171 1616 Pfam Formin Homology 2 Domain 1350 1585 IPR015425 -
Car11g00171 1616 MobiDBLite consensus disorder prediction 830 1208 - -
Car11g00171 1616 ProSiteProfiles C2 tensin-type domain profile. 183 322 IPR014020 -
Car11g00171 1616 MobiDBLite consensus disorder prediction 652 674 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 1596 1616 - -
Car11g00171 1616 MobiDBLite consensus disorder prediction 778 792 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00171 Car13g00929 CCT
Car10g00196 Car11g00171 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00171 Car-Chr11:942519 Car19g00151 Car-Chr19:1331078 3.41E-116 dispersed
Car01g00745 Car-Chr1:4513928 Car11g00171 Car-Chr11:942519 7.59E-37 wgd
Car10g00196 Car-Chr10:937448 Car11g00171 Car-Chr11:942519 0 wgd
Car11g00171 Car-Chr11:942519 Car13g00929 Car-Chr13:9535938 1.85E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00171 - - cpep:111792358 1606.27