Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00171 | GGGGCGTTGTACGTGCTGAGAGTGTTCGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCGTCTTTCATGGTTTTCAACTTCACAGAAGGTGGTAAGCGAAGTCAAGTTTCTGATGTACTGAGTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATACGAGGGATGTCCTTTATTGCCATTGGAGATGGTTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGCAGGGTCAACAGAATGTGTTATTGATGCATTGTGAAAGGGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGAAAACAGTACAGTGGGGAGCAGAAGACTCTTGACATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTCTTATCTCCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAACTTAGGTTCTGATTGGCCTCCGGCAGATACACCCCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAAGGGTGTAGGCCTGTTGTGCGTGTCTATGGTCAAGACCCCTCAATACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCTATCAACAGAAAACATATCCGAAACTACCAACAGGAAGAGTGTATGCTGGTGAAAGTTGATATTAATTGCCATATTCAAGGGGACGTAGTTGTTGAATGCATCCATTTGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAATATTATAATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCAAGGGACCAGCTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGGTGCTGATGCTGATGTCGTTGTCCCCAATCTTACCACAACCTTTGATGATGAAGATGAAAATGAAGCTGGAGTTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATTTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGATCCAATCATCCTCAATTGATCAATCGTGCAGACCGTAAAGCAGATAGGAAGGAGGACTTTGATCCGCCTGCATTCCAAGATTGTGCAACTGATGATGGAAATCTCAAGCATGTGAAGAAATCAGATTTTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCCAACCTTAATGCTGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCCTGGTTGCTGCTGCTAATGTCTTGACTCATGTGAAAGCCCAGGGGTTGGTAGATGCCGCATATGGAAAAGTTGAAGATAATGAAGAAAAGGATGATGGAAGAGGTGCTGCACCTGCGAGATTGGAAAACAAGGTTCTTCAGAAAAAGTTGAGTGCCGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACAGCCTATTCCAAGTGGAAAACCTACCACTGATATGGTTTCAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGCTTCTAGGTGGATTCCTCCTAACAAAGGCTCTTATATGAACTCTATGCATGTATCCTATCCTCCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCCTGTATTGCACCATCAAAGGATACAAGTGCAAATTCCAAAACAAAGGGTGCTGCCACCCTTGATTCTCTGGTTTCTACATATTTATTTAGTGAACGAAAAGATCAAAAAGTGGATTCTGTAAGGTCTTCACACTCTGCACCTGGGGAACTCATGCATGGCGCACCATCTCCAGTTGAGTCAATTGAGGAAGCAGATTCTTCCTCTGAAACTCCAAAACCATCACAAAGTGATTCACAACTTGAAGTAACACCTCCTCCCCTTCCCACAAAACCTCCATCTCCACATTTACCATCACTCCCCAGGGCAGATGCAATACCTCCTCCACCTCCTCCACCACCCCCATCCTTGCACCATATGGAGTCGACATACTCTGTTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATTGCTAACTCATCAAAGGCAGTGACTCCCCCTCTCCCTCCCCCTCCTCCATTCAGTAGGCAGAACAGTGAGATACTTTTGCCCATTTCTTCTACACAGTCATCATGGGAGCAAAGATATTCTTCTGTTTCTAGTGTAAAGGTGGCTGGTTCTGTACCTCCTCCACCTGCACCCCCATCTCGACCTCGACCTCACTCTGTGGCCATGCCATCTACATTAAAGAATATTGCAAGTATTCCTCGTGTACCTGTTGTATCTCCTCCTTCAGCATTTCTTTCATTGGCATATAAAGGTATATTGCTATCATCACCCCCACCTCCCCCTCTTTCTAGGATACATGAACTACTTGCTCCACCATCTTCACCACACCTGCCTGCTCCAATATGTGGTGGTAAAACACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCCCCACCCCCACCCCCATTAATGCAAAGGGCACTTCCTTCACCATCTCCAGGGGAAGGAACTCCACCCCCACCCACGCATGGTGTATCTCCAACACTACCTTTATTACATGGAGCACCACAGCCTCCCTCACCACCTCCTCCCCCACCACCTTCAAGTTATGGAGCACCTCCTCCTCCACCCCTTCCAATGTTTGGAGCACCCCCTCCTTTGATCCCTCCCATGCAAATGCAGAGGAGACCTCCTACACCTCCTCCATCGCCTCCAATGCATGGGTCTCCTCCACCAATAAATGCAACTCCACCGCCTCCCATACGTGGGGCTTCTCCACCACCCCCACCTCCACTAATGCATGTGGCTCCTCTACCATCGCCACCGCCACCAATGCTTGGGAATCCTCCTCCACCTCCACCTCCACCTCCACCTCCACCAATGCACGGGAATCCTCCACCACCCCTGCCACCTCCACCAATGCATGGTGCTCCTCCACCACCCCCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCCTCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCTACCCCTCCACCAATGTGTGGGGCTCCTCCACCCCCACCGCCACCCTCAGCCGGGGATGGTGGAGCCCCTCCACCACCTCCGCCACCCGGGGGTGGTGGAGTCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCTGCACCCCCTCCTCCGCCAGGTGGTCATGCTCCAGCCCCACCTGGACCTCCAGGTGGTGGACCTCCTCCACCTCCACCGCTAGGTTCAAAAGGAGGAGCTGTTGCACCTCCTGACCCAAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTAACACGCTCAGCTACTACTGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAGGTTACAAGAGCTCTGCAAGGGAGCTTATGGGAAGAACTACAGAGATATGGCGAGACTCAAATGTATTTTGAATTCTCTTTTTATGTATCTTGCCGATTTGAATTGAAATTAATCCAGTCTTCCAAGAGGATATTTCTCAGTACTTTTAATGATTTTATGCTGTTTGCTTCTTATTGGTGCTTCCTTTTCCTCCCTCTCCTCAGTGCATCAGAGTTTGATGTGACCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCTGATGGAGGCAAATCTCGAAGGAAGTCTGCTGGATCCAAAACTGACAAAGTTCATCTGATTGACCTCAGAAGAGCTAACAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGGGTAGAGTCGAAGATGAAAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGTTATCAGAATTTAAGAAGAGTTTGAATACTGTCAACTCGGCTTGTCACGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACGGCGAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCAGCTCTTCTTAAATTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCGGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAATTTGTTGCTTCTGAAAATGATGGCCCAGTCTCCGAAATTTTTCGAAAGACGTTGAAAGAATTCATTGCTACTGCTGAGACAGAGGCGGCGTCGGTGACAAATCTGTACTCTGTTGTGGGTAGAAATGCAGACGCACTTGCATTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTATAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAATCCGATAAGGATGCTGAAATGGAGAATGCCAAAGGAATTAAATAG | 4851 | 47.5 | GALYVLRVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFTEGGKRSQVSDVLSQYDMTVMDYPRQYEGCPLLPLEMVHHFLRSSESWLSLQGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLDMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPADTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSIPANRTSKLLFSTSINRKHIRNYQQEECMLVKVDINCHIQGDVVVECIHLDEDLVHEEMMFRVMFHTTFVRSNIIMLNRDEVDVLWDARDQLPKDFRVEALFLGADADVVVPNLTTTFDDEDENEAGVASPEEFFEVEEIFSNAMDGQEAKGSNHPQLINRADRKADRKEDFDPPAFQDCATDDGNLKHVKKSDFDAVKDIAVDDVKYKLDENIYSNLNAVKDIAVDDGDMNSNSFLVAAANVLTHVKAQGLVDAAYGKVEDNEEKDDGRGAAPARLENKVLQKKLSADGSRQKSEKLQTPIPKKQPIPSGKPTTDMVSAKQKVKQQETQGFSAKQAKPNAASRWIPPNKGSYMNSMHVSYPPSRYNSAPAALACIAPSKDTSANSKTKGAATLDSLVSTYLFSERKDQKVDSVRSSHSAPGELMHGAPSPVESIEEADSSSETPKPSQSDSQLEVTPPPLPTKPPSPHLPSLPRADAIPPPPPPPPPSLHHMESTYSVPPLSVSLAPPPIANSSKAVTPPLPPPPPFSRQNSEILLPISSTQSSWEQRYSSVSSVKVAGSVPPPPAPPSRPRPHSVAMPSTLKNIASIPRVPVVSPPSAFLSLAYKGILLSSPPPPPLSRIHELLAPPSSPHLPAPICGGKTPPPITSVHSAPPPPPPPPLMQRALPSPSPGEGTPPPPTHGVSPTLPLLHGAPQPPSPPPPPPPSSYGAPPPPPLPMFGAPPPLIPPMQMQRRPPTPPPSPPMHGSPPPINATPPPPIRGASPPPPPPLMHVAPLPSPPPPMLGNPPPPPPPPPPPPMHGNPPPPLPPPPMHGAPPPPPPPPPMHGNPPPPSPPPPMHGNPPPPTPPPMCGAPPPPPPPSAGDGGAPPPPPPPGGGGVPAPPPPPWGGGAPAPPPPPWGGGAPPPPPPPGGGGAPPPPPPPGGGGAPAPPPPPGGHAPAPPGPPGGGPPPPPPLGSKGGAVAPPDPRGLSAGRGRGLTRSATTAPRRSSLKPLHWSKVTRALQGSLWEELQRYGETQMYFEFSFYVSCRFELKLIQSSKRIFLSTFNDFMLFASYWCFLFLPLLSASEFDVTEIETLFSATVPKPADGGKSRRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMGYTGDKDNLGKCEQYFLELMKVPRVESKMKVFSFKIQFGSQLSEFKKSLNTVNSACHEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLKFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFVASENDGPVSEIFRKTLKEFIATAETEAASVTNLYSVVGRNADALALYFGEDPARCPFEQVIVTLLNFMRLFRKAHEENCKQAELEKKKSDKDAEMENAKGIK | 1616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 942519 | 957111 | - | Carg18208-RA | Car11g00171 | 156124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 529 | 554 | - | - | |
Car11g00171 | 1616 | Pfam | C2 domain of PTEN tumour-suppressor protein | 183 | 319 | IPR014020 | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 621 | 796 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 675 | 708 | - | - | |
Car11g00171 | 1616 | Coils | Coil | 1586 | 1606 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 847 | 1178 | - | - | |
Car11g00171 | 1616 | Coils | Coil | 1492 | 1512 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 501 | 564 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 750 | 775 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 731 | 748 | - | - | |
Car11g00171 | 1616 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1199 | 1611 | IPR015425 | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 713 | 729 | - | - | |
Car11g00171 | 1616 | Pfam | Formin Homology 2 Domain | 1203 | 1348 | IPR015425 | - | |
Car11g00171 | 1616 | Pfam | Formin Homology 2 Domain | 1350 | 1585 | IPR015425 | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 830 | 1208 | - | - | |
Car11g00171 | 1616 | ProSiteProfiles | C2 tensin-type domain profile. | 183 | 322 | IPR014020 | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 652 | 674 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 1596 | 1616 | - | - | |
Car11g00171 | 1616 | MobiDBLite | consensus disorder prediction | 778 | 792 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g00171 | Car13g00929 | CCT | |
Car10g00196 | Car11g00171 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00171 | Car-Chr11:942519 | Car19g00151 | Car-Chr19:1331078 | 3.41E-116 | dispersed | |
Car01g00745 | Car-Chr1:4513928 | Car11g00171 | Car-Chr11:942519 | 7.59E-37 | wgd | |
Car10g00196 | Car-Chr10:937448 | Car11g00171 | Car-Chr11:942519 | 0 | wgd | |
Car11g00171 | Car-Chr11:942519 | Car13g00929 | Car-Chr13:9535938 | 1.85E-40 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00171 | - | - | cpep:111792358 | 1606.27 |