Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00191 ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTGACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCCTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG 936 43.06 MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPPPTPPPFAFDMKDPSMMHIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGGSGKDGAASGSS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1099966 1100901 + Carg09198-RA Car11g00191 156144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00191 311 MobiDBLite consensus disorder prediction 292 311 - -
Car11g00191 311 MobiDBLite consensus disorder prediction 1 32 - -
Car11g00191 311 MobiDBLite consensus disorder prediction 1 27 - -
Car11g00191 311 Pfam TCP family transcription factor 51 114 IPR017887 -
Car11g00191 311 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00191 Car13g00905 CCT
Car10g00278 Car11g00191 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00191 Car-Chr11:1099966 Car20g00876 Car-Chr20:8359926 6.70E-42 dispersed
Car10g00278 Car-Chr10:1325296 Car11g00191 Car-Chr11:1099966 1.41E-134 wgd
Car11g00191 Car-Chr11:1099966 Car13g00905 Car-Chr13:9396352 9.60E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4239 PF03634 TCP 4.40E-23 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00191 - - mcha:111007241 384.415