Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00205 ATGCAGGGCATACACTCGATTGGTGGCGGAAGCCGCTTGTTTGGCGGCGGAGGAGGTGGCGGCGGGGACCGTAGCCTGAGGCCCCACCTCCACCACCACCACCAGAACCACCAAGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTATAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTACGCAACGTTCCTGTCGGTGGTGGCTGTCGGAAAACCAAACGAGCTTCCAAGTCCAAGCCGACATCTGACACAACCGGGCCTCCACCTCCACTTCACGAACAGAAATCCACCTCTCATTCTAGCAGCGAGAGCTCTAGTCTCACCGCCGCAACAACAACCGCCGCCGCCGCAACCGAGGCTGTTTCCGCTCCATCTACGAGTTCCGCGTCGACTCTATTAACCGTACAGGATTCGAAATTGTTCCCCACTCCTAGTACAAACACGAATTTCGAGATGGCGGCAGCTCCAGTTTCGGACTGCGGAATTTTCTCGGAAATCGGAAGCTTCACGAGCTTGATCACGTCGTCGAACGAGACATTGCCGTTCGGATTCGGCAACATCGCTGACGCGACGCCTTTCGCGATGAATCATCAGTTTCAAAATCAATGGACGCCACAGAGAATGATGAACGTTAACGACGAACTAAAGATGCAGGAAATCACAGGCGGCGGCGGCGGCGGCGGCGGCGGGTACATGGATCAGACGGCTCACGTCGATCCATCAGGGCTTCAGAATAGCAGATCAAGTAACATTGGATTCGGACCGTTGGATTGGCAGTCAAACGGAGATCATCAGGTTCTTTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAGTGATCCAGACCCCCCCAATCTGTACCTTCCGTAA 948 53.8 MQGIHSIGGGSRLFGGGGGGGGDRSLRPHLHHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRASKSKPTSDTTGPPPPLHEQKSTSHSSSESSSLTAATTTAAAATEAVSAPSTSSASTLLTVQDSKLFPTPSTNTNFEMAAAPVSDCGIFSEIGSFTSLITSSNETLPFGFGNIADATPFAMNHQFQNQWTPQRMMNVNDELKMQEITGGGGGGGGGYMDQTAHVDPSGLQNSRSSNIGFGPLDWQSNGDHQVLFDLPNAVDQAYWSQNQWSDPDPPNLYLP 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1181309 1182256 - Carg09184-RA Car11g00205 156158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00205 315 MobiDBLite consensus disorder prediction 85 133 - -
Car11g00205 315 MobiDBLite consensus disorder prediction 1 32 - -
Car11g00205 315 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Car11g00205 315 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Car11g00205 315 MobiDBLite consensus disorder prediction 108 133 - -
Car11g00205 315 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00205 Car18g00159 CCT
Car11g00205 Car13g00729 CCT
Car10g00264 Car11g00205 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00199 Car-Chr7:1120469 Car11g00205 Car-Chr11:1181309 2.19E-32 dispersed
Car11g00205 Car-Chr11:1181309 Car03g00776 Car-Chr3:6481922 1.53E-33 dispersed
Car10g00264 Car-Chr10:1260510 Car11g00205 Car-Chr11:1181309 9.22E-136 wgd
Car11g00205 Car-Chr11:1181309 Car13g00891 Car-Chr13:9322129 7.83E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4241 PF02701 zf-Dof 3.80E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00205 - - cmax:111469312 541.962