Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00205 | ATGCAGGGCATACACTCGATTGGTGGCGGAAGCCGCTTGTTTGGCGGCGGAGGAGGTGGCGGCGGGGACCGTAGCCTGAGGCCCCACCTCCACCACCACCACCAGAACCACCAAGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTATAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTACGCAACGTTCCTGTCGGTGGTGGCTGTCGGAAAACCAAACGAGCTTCCAAGTCCAAGCCGACATCTGACACAACCGGGCCTCCACCTCCACTTCACGAACAGAAATCCACCTCTCATTCTAGCAGCGAGAGCTCTAGTCTCACCGCCGCAACAACAACCGCCGCCGCCGCAACCGAGGCTGTTTCCGCTCCATCTACGAGTTCCGCGTCGACTCTATTAACCGTACAGGATTCGAAATTGTTCCCCACTCCTAGTACAAACACGAATTTCGAGATGGCGGCAGCTCCAGTTTCGGACTGCGGAATTTTCTCGGAAATCGGAAGCTTCACGAGCTTGATCACGTCGTCGAACGAGACATTGCCGTTCGGATTCGGCAACATCGCTGACGCGACGCCTTTCGCGATGAATCATCAGTTTCAAAATCAATGGACGCCACAGAGAATGATGAACGTTAACGACGAACTAAAGATGCAGGAAATCACAGGCGGCGGCGGCGGCGGCGGCGGCGGGTACATGGATCAGACGGCTCACGTCGATCCATCAGGGCTTCAGAATAGCAGATCAAGTAACATTGGATTCGGACCGTTGGATTGGCAGTCAAACGGAGATCATCAGGTTCTTTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAGTGATCCAGACCCCCCCAATCTGTACCTTCCGTAA | 948 | 53.8 | MQGIHSIGGGSRLFGGGGGGGGDRSLRPHLHHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRASKSKPTSDTTGPPPPLHEQKSTSHSSSESSSLTAATTTAAAATEAVSAPSTSSASTLLTVQDSKLFPTPSTNTNFEMAAAPVSDCGIFSEIGSFTSLITSSNETLPFGFGNIADATPFAMNHQFQNQWTPQRMMNVNDELKMQEITGGGGGGGGGYMDQTAHVDPSGLQNSRSSNIGFGPLDWQSNGDHQVLFDLPNAVDQAYWSQNQWSDPDPPNLYLP | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1181309 | 1182256 | - | Carg09184-RA | Car11g00205 | 156158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00205 | 315 | MobiDBLite | consensus disorder prediction | 85 | 133 | - | - | |
Car11g00205 | 315 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Car11g00205 | 315 | ProSitePatterns | Zinc finger Dof-type signature. | 42 | 78 | IPR003851 | GO:0003677|GO:0006355 | |
Car11g00205 | 315 | Pfam | Dof domain, zinc finger | 38 | 94 | IPR003851 | GO:0003677|GO:0006355 | |
Car11g00205 | 315 | MobiDBLite | consensus disorder prediction | 108 | 133 | - | - | |
Car11g00205 | 315 | ProSiteProfiles | Zinc finger Dof-type profile. | 40 | 94 | IPR003851 | GO:0003677|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g00205 | Car18g00159 | CCT | |
Car11g00205 | Car13g00729 | CCT | |
Car10g00264 | Car11g00205 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00199 | Car-Chr7:1120469 | Car11g00205 | Car-Chr11:1181309 | 2.19E-32 | dispersed | |
Car11g00205 | Car-Chr11:1181309 | Car03g00776 | Car-Chr3:6481922 | 1.53E-33 | dispersed | |
Car10g00264 | Car-Chr10:1260510 | Car11g00205 | Car-Chr11:1181309 | 9.22E-136 | wgd | |
Car11g00205 | Car-Chr11:1181309 | Car13g00891 | Car-Chr13:9322129 | 7.83E-33 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4241 | PF02701 | zf-Dof | 3.80E-33 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00205 | - | - | cmax:111469312 | 541.962 |