Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00225 ATGGATGCCCGCCGCGCCTCTCGCGTCGTCATCGACCCCAAAGTTCGGCAGGTCGGCTTCTTCACCCCCGACGCCCCGCATTCTCCGGGTGGGGCCCTTCCCGCTTCGCCCGACTGCACTACTTCACTGCTCCCCGACTCTCCGACCAGTAATTCTTTGTCTCCTGTAATGATTCCGCCTCCACGTCACCCTTCCGATAACCTTTCCTCCCGGTTGGTTGTTCTGCCGGTTCCGGCATCGGGAAATTGGAGGCACCCTGAGGACCTGGTCCGTGTTGGGAGCCACAATCCCTCAGAAATGCTGCTCCGATCGTCACCGATGGCGTCGCATTCGTCTCGAATTGCAGGTGAAGAATTGGAATTCTCGGAGGTTTCGTCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCGTCTAGCTGCCCTGGCGTTGGATTCTACATGGCGGCTAAGCGGGGGGATAATTTGGAGACAATGCCTGCCAATAGTGTGAGGACATTGGGAACTAACAAGCCTGCTGGAACGACAGAAAAGACGGGAGGAGCATCCACAGAGGCCAAAGACCATTTTCCTTCAAGTTCAAAACCCTTGAAGGAAAAAACTACTAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAGCGAGCAGCAAAAGTTTCTGGAAAAGGTGAGGTAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCCGGTAAAGTTGGGAAACAGCCTTCAACAGTTAAAGGTCCTGCTACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTCGAAAGGGCTAAAAAGCGAGCTGTGTTTAATCAAACTGAAGCAAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAGGGGACTCAACTTCCTGATCTTGTGTCAAAGTTTTTCCAACTCGATACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATACATGGCTGGAGATATATCTGGCGGTAATGCTCGTTGTATAGCAATGCTCCATGCATTTCAGGAGGCTATTAAAGACTACTCAACTCCGCCACAGAAATCTCTCGTTAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCATTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTGAAAAATCGCATTGCCAAATTACCACCAAGTCTTCTAGAATCTGAGGCGAAAGCTACACTTTCCCTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGATGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCACCATGTGTTGTAGAGATGCTTCTATTGTATGCTCATGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTCAGTTGTACTTACACTCATATAAATGCTATTTCCTATGTGATGGGTGAAGTAAACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCTAACGGAACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTTCATGTTCCAGTATTATTCTGCTGTGAAGCATATAAATTTCATGAAAGGGTACAACTTGATTCAATATGCTTTAATGAATTAGGGGACCCAGATGCTATATCAAAGATTTCAGGAAGGGCTGATATTAGTTATCTAGATAGTCTGACTTCTAAAGAAAATTTGCAACTTCTGAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGTCCTTACCTAAACATGGTCGATTGCAGATCCCGCCAACAAGCGTGCCCGTGATCGTACGCGAGTATCGCAGAGAGCACCTCCTATGGGTATGA 2010 46.47 MDARRASRVVIDPKVRQVGFFTPDAPHSPGGALPASPDCTTSLLPDSPTSNSLSPVMIPPPRHPSDNLSSRLVVLPVPASGNWRHPEDLVRVGSHNPSEMLLRSSPMASHSSRIAGEELEFSEVSSASVLLRRSGSGKLASSCPGVGFYMAAKRGDNLETMPANSVRTLGTNKPAGTTEKTGGASTEAKDHFPSSSKPLKEKTTKAERRALQEAQRAAKVSGKGEVNKSGTASGATAGKVGKQPSTVKGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDISGGNARCIAMLHAFQEAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSLLESEAKATLSLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSPCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMGEVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKISGRADISYLDSLTSKENLQLLNLMYDATPSDYISMIVTDYGMSLPKHGRLQIPPTSVPVIVREYRREHLLWV 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1271692 1277151 + Carg09164-RA Car11g00225 156178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00225 669 MobiDBLite consensus disorder prediction 164 192 - -
Car11g00225 669 MobiDBLite consensus disorder prediction 193 214 - -
Car11g00225 669 MobiDBLite consensus disorder prediction 19 54 - -
Car11g00225 669 MobiDBLite consensus disorder prediction 226 240 - -
Car11g00225 669 MobiDBLite consensus disorder prediction 164 281 - -
Car11g00225 669 MobiDBLite consensus disorder prediction 262 281 - -
Car11g00225 669 Pfam Initiation factor 2 subunit family 350 639 IPR000649 GO:0044237
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00241 Car11g00225 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00225 Car-Chr11:1271692 Car15g00771 Car-Chr15:4365983 2.41E-18 dispersed
Car11g00225 Car-Chr11:1271692 Car11g00227 Car-Chr11:1279090 0 proximal
Car10g00241 Car-Chr10:1148295 Car11g00225 Car-Chr11:1271692 0 wgd
Car10g00241 Car-Chr10:1148295 Car11g00225 Car-Chr11:1271692 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00225 K03680 - csv:101215104 951.044