Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00227 ATGGATGCTCGGCGAGGATCCCGCGTCGTCAAACCCAAAGTTCGTCAGGTCGGATTCTTCACTCTCGACGCTCCTAACCCCCCCGGACGCTCACTATCTGGTCCGGTCGGATTTGGTCCTTCTCAACAATCCCTCTCTCCACCCACCGATCCCTTGTCTCCGGTCATGATTCCTCCTCCTCGTCATCTCTCCGATAACCTTGCCTCACGCTCTACTATTCTTCCTGTTCCGACTCCGGCCAATTGGAGGAATTCTGGTGATCAGATTCATGTTGGCAGTTATAACCCTTCCCAGACCCTGCTTGCGACTTCTCCTTCGAGTAGAATTTGGGACGATGAGTTGGAGATGTCCGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCTGGGAAGATTGCGTCGAGCCTTCCTGGGCTTGGAGTCCACATGGCGGCTAAGTCGTCGGAGAATTCGCAGGCGGTGCCTCTCAGGACGTTGGGACCTAATAAGCCTGCTGGAGTTGCAGAAAATAATGGAGGGGCGCCCACAGAGGTGCAAAATCAACCACCGCCATCAAGTTCAAAATCCCTGAAGGCAAAAACAACGAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTGAGACAAATAAGTCAGGTACTGCTCCTGGTAAAGCTGTGAAGCAGCCTTCGGCTATGAAAGATAGCACGGCTGCACCTTCGGTTGCATCTACTGATAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCGCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTCGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGTTTCTGAAGAATCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTAGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGATCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATGTTAATTATCTAGATAATTTGACTGCTAAAGAACAACTGCAATGTCTAAATTTAATGTATGATGCTACACCTTCAGAGTATGTCTCAATGATTGTCACAGATTATGGCATGATCCCGCCTACAAGCGTACCCGTGATCGTACGCGAGTATCGGAGAGAGCACCTGTGGATTTAA 1950 46.15 MDARRGSRVVKPKVRQVGFFTLDAPNPPGRSLSGPVGFGPSQQSLSPPTDPLSPVMIPPPRHLSDNLASRSTILPVPTPANWRNSGDQIHVGSYNPSQTLLATSPSSRIWDDELEMSEDSSTSVPYRRSGSGKIASSLPGLGVHMAAKSSENSQAVPLRTLGPNKPAGVAENNGGAPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGETNKSGTAPGKAVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDVNYLDNLTAKEQLQCLNLMYDATPSEYVSMIVTDYGMIPPTSVPVIVREYRREHLWI 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1279090 1284256 + Carg09162-RA Car11g00227 156180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00227 649 MobiDBLite consensus disorder prediction 78 106 - -
Car11g00227 649 MobiDBLite consensus disorder prediction 251 279 - -
Car11g00227 649 MobiDBLite consensus disorder prediction 175 193 - -
Car11g00227 649 Pfam Initiation factor 2 subunit family 341 632 IPR000649 GO:0044237
Car11g00227 649 MobiDBLite consensus disorder prediction 36 50 - -
Car11g00227 649 MobiDBLite consensus disorder prediction 20 66 - -
Car11g00227 649 MobiDBLite consensus disorder prediction 78 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00241 Car-Chr10:1148295 Car11g00227 Car-Chr11:1279090 0 dispersed
Car11g00227 Car-Chr11:1279090 Car15g00771 Car-Chr15:4365983 9.54E-18 dispersed
Car11g00225 Car-Chr11:1271692 Car11g00227 Car-Chr11:1279090 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00227 K03680 - csv:101214144 1110.52