Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00230 ATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCTAAGGCGACTATGACTAAAATTATCAAAGAGATGTTGCCCCCTGATGTTCGTGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTGTCGTCGGAGTCCAATGAAGTTTGTAGCAAAGAAGATAAAAGAACAATTGCACCTGAGCACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAGTACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGGTAATGCTCCGCGAGCAAGACTCGTTGAAAGGTGGAAAGTGGAGTAATGGAGCCGAGATGACTGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCAGAAGCACGTGCAAGAATGAATGGGAGTAACACCGCTCCGAAGCAACTGGAGCCTGAGCAAAGTTTAGAGAGCTAA 486 45.27 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMVMLREQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1293831 1296652 - Carg09159-RA Car11g00230 156183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00230 161 MobiDBLite consensus disorder prediction 141 161 - -
Car11g00230 161 MobiDBLite consensus disorder prediction 145 161 - -
Car11g00230 161 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01107 Car-Chr2:7650403 Car11g00230 Car-Chr11:1293831 2.69E-08 dispersed
Car10g00245 Car-Chr10:1164343 Car11g00230 Car-Chr11:1293831 3.66E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4243 PF00808 CBFD_NFYB_HMF 3.20E-22 CL0012 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00230 K21751 - csv:101214627 295.434