Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00244 ATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCCATCAGGCCTTGTCTTCAATGGATCAAAACCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTTGCCAAATTCTACGGCCGAGCTGGCCTCGTTAATCTCATCAATGCCGGCCCCGATCATCTCCGCCCTGGTATTTCATCATATTCTACTCTGTTTCAATTACTCTGTTTTCATTGCTCTGTTTCAGTTACCTAAGGCTGTTTTTTGTTTTTTGGGTGTTTCAGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAACCCGATTTATGGGTCGGCCGGACTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTCAAAGGTGCACCGATTCTGTCTGTTTCTTCTGAGACTGCGGTGTCGCACATGGGCCCACCGTTGAAGGGCTGCGACATCCGCCACGTTTCGAAACAGCAAGGCGCCGCCCCCGATTCCGCGCTCCGGAAGATCAAAACACGACGGCGGTTCAAGCGATCGGCGCCCAACAAGCCGATGCCGAAGGAGGAGCCGGTGGTGGTAAATGAGTTCGTATTCGACGATCCGACTCGAGTTGTATCGGAGCCCCGGTGTTTGAAGTTCGAGCTGGATAGTTGGGTGGGCCATAAATCGCAGGAGAAGGACTGCAGCAGCGGCAGCAGCGACGAGGCCGAGTGTTTGTCGGTGGAGGGTTCTGCAGTTGGGCAGGGTGGTGACGTGGAGTTAGAACTTAGCTTGGGGTTATAG 795 54.34 MDAEFFAKAAVKAAPSGLVFNGSKPPNPKPTPPSSLPNSTAELASLISSMPAPIISALVFHHILLCFNYSVFIALFQLPKAVFCFLGVSAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSHMGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPTRVVSEPRCLKFELDSWVGHKSQEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1370866 1371660 - Carg09145-RA Car11g00244 156197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00244 264 Pfam Lateral organ boundaries (LOB) domain 90 128 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00222 Car11g00244 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00244 Car-Chr11:1370866 Car14g00743 Car-Chr14:4170324 8.69E-40 dispersed
Car16g00839 Car-Chr16:6032229 Car11g00244 Car-Chr11:1370866 2.97E-23 transposed
Car10g00222 Car-Chr10:1062938 Car11g00244 Car-Chr11:1370866 2.73E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4244 PF03195 LOB 1.30E-05 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00244 - - csv:101219232 267.314