Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00259 | ATGGCGACACCGTTGACAGGGCTACAACACCGGGACGGTGGCGGAGGAGTGGCTTTCTTGGCTAATTCTGTAAACAAAATGGATTCCGCCTCGTCTCCGTCGTCGCCAAATGATTGTCTGAGGAGCTCCGAGCCTCAGTCTCCGATTCTTATTTTTCTTTTCTTCCATAAAGCAATTCGCAATGAGCTCGATACGCTTCACCGGCTGGCCATGGCGTTCGCCACCGGCCAGAGGGCAGATATTCGCCCATTATTTGGACGATACCATTTTTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATCTTTCCTGCACTTGATATTCGTGTGAAGAATGTGGCTCAGACCTATTCCCTTGAGCACAAGGGTGAAAGCAATCTGTTCGATCATCTTTTTGAGCTTCTTAATTCTAATACACAAAATGATGAAAGCTTCCCAAGGGAGTTAGCGTCCTGCACTGGTGCCCTAAAGACATCTGTAAGCCAGCACATGGCCAAGGAAGAAGAGCAGGTACTCTTTCACTGCTGTCCATGTCTCCCTAGTATCTTTTGCAAATCTCTGATCACTAATTAG | 585 | 47.35 | MATPLTGLQHRDGGGGVAFLANSVNKMDSASSPSSPNDCLRSSEPQSPILIFLFFHKAIRNELDTLHRLAMAFATGQRADIRPLFGRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVLFHCCPCLPSIFCKSLITN | 194 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1431845 | 1433767 | - | Carg09130-RA | Car11g00259 | 156212 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00259 | 194 | Pfam | Hemerythrin HHE cation binding domain | 52 | 175 | IPR012312 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car10g00290 | Car-Chr10:1392582 | Car11g00259 | Car-Chr11:1431845 | 2.62E-07 | dispersed | |
| Car11g00259 | Car-Chr11:1431845 | Car10g00161 | Car-Chr10:767033 | 5.78E-11 | dispersed | |
| Car11g00258 | Car-Chr11:1423895 | Car11g00259 | Car-Chr11:1431845 | 2.33E-08 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00259 | K16276 | - | csv:101215023 | 345.125 |