Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00269 ATGTTTCACTTGTTCATGTTGGTCCAGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGGAAAACTGATGAGTCTCTTCTTCAAGAAAGTTCTGCTGGGGGATGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTATTAGGTCAAACGGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCACGATCTTTGACTACTGATAAATTGTCTAATAATCTTAATGGAGGAAGCTCTTTAAAGGCTATTGTTTTGACAAGGGAACACAAGGCAATCTACCCACAAGAGAGAGCTCGTATTCAAAAGGCTGGTGGCATTGTTGGTTCAAATGGTCGATTGCAGGGCCGTCTTGAAGTTTCTCGGGCACTCGGAGATCGCCAATTTAAAAAGTTGGGCGTTATAGCAACTCCAGACATTCATTCTTTTGAATTGACTGATAGGGAGCATTTTATCATTCTCGGATGTGATGGACTTTGGGGGGTTTTTGGACCAAGTGATGCTGTCGATTTTGTCCAGAAATTATTGCAGGAGGGCTTGCCCATAACATCAGTAAGTCGACGTCTTGTGAGGGAAGCTATTCGTGAACGGCGCTGTAAAGATAACTGTACTGCAATGGTCATTGTTTTCAGGCCCAAGTGA 657 43.23 MFHLFMLVQLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTTDKLSNNLNGGSSLKAIVLTREHKAIYPQERARIQKAGGIVGSNGRLQGRLEVSRALGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAVDFVQKLLQEGLPITSVSRRLVREAIRERRCKDNCTAMVIVFRPK 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1476101 1483286 + Carg09120-RA Car11g00269 156222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00269 218 Pfam Protein phosphatase 2C 14 204 IPR001932 -
Car11g00269 218 ProSiteProfiles PPM-type phosphatase domain profile. 1 215 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00269 Car-Chr11:1476101 Car01g01594 Car-Chr1:13166860 5.38E-28 dispersed
Car11g00269 Car-Chr11:1476101 Car09g00033 Car-Chr9:162494 5.12E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00269 K17500 - csv:101216467 387.497