Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00269 | ATGTTTCACTTGTTCATGTTGGTCCAGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGGAAAACTGATGAGTCTCTTCTTCAAGAAAGTTCTGCTGGGGGATGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTATTAGGTCAAACGGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCACGATCTTTGACTACTGATAAATTGTCTAATAATCTTAATGGAGGAAGCTCTTTAAAGGCTATTGTTTTGACAAGGGAACACAAGGCAATCTACCCACAAGAGAGAGCTCGTATTCAAAAGGCTGGTGGCATTGTTGGTTCAAATGGTCGATTGCAGGGCCGTCTTGAAGTTTCTCGGGCACTCGGAGATCGCCAATTTAAAAAGTTGGGCGTTATAGCAACTCCAGACATTCATTCTTTTGAATTGACTGATAGGGAGCATTTTATCATTCTCGGATGTGATGGACTTTGGGGGGTTTTTGGACCAAGTGATGCTGTCGATTTTGTCCAGAAATTATTGCAGGAGGGCTTGCCCATAACATCAGTAAGTCGACGTCTTGTGAGGGAAGCTATTCGTGAACGGCGCTGTAAAGATAACTGTACTGCAATGGTCATTGTTTTCAGGCCCAAGTGA | 657 | 43.23 | MFHLFMLVQLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTTDKLSNNLNGGSSLKAIVLTREHKAIYPQERARIQKAGGIVGSNGRLQGRLEVSRALGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAVDFVQKLLQEGLPITSVSRRLVREAIRERRCKDNCTAMVIVFRPK | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1476101 | 1483286 | + | Carg09120-RA | Car11g00269 | 156222 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00269 | 218 | Pfam | Protein phosphatase 2C | 14 | 204 | IPR001932 | - | |
Car11g00269 | 218 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 215 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00269 | Car-Chr11:1476101 | Car01g01594 | Car-Chr1:13166860 | 5.38E-28 | dispersed | |
Car11g00269 | Car-Chr11:1476101 | Car09g00033 | Car-Chr9:162494 | 5.12E-29 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00269 | K17500 | - | csv:101216467 | 387.497 |