Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00270 ATGGCAAAGGGAAAAATTGTGTCTGAGAAGATTAAGCTCATTCTTGCCTTGATTGCTCTGCAATTCTGCTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTGAACATTGGTGTTAGTAAAGTCGTGTATCCGGTGTATCGAAACGCGATTGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTCCTTGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTACTTGGAATCACTGCCAATCAAGGATTTTACCTCTTGGGGCTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCTATTACCTTTGTGATGGCTTCTGTTCTAAGGCTTGAGCAAATCAACTTCAGAAGGAGAGATGGGTTGGCAAAGCTTTTGGGAACTATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTTACTAACTCAAGGAAGTAGCATCTTGGGGATGGATGAACCTACACTTAAAGTGCAGAACTGGAGATGGGGCTGCATATACCTGCTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAGCTGACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATTGCTGGCTTTGTGGAAACAGACTATCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACAATCTTATACGCTGGTGTTGTAGCCTCTGGCATTGTCATATCTCTCCAAACATGGTGCATTCAAAACAGTGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTCGTAGCCATCATGGCGTTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGTAA 933 43.3 MAKGKIVSEKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMASVLRLEQINFRRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNLLTQGSSILGMDEPTLKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVISLQTWCIQNSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGG 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1484703 1487130 + Carg09119-RA Car11g00270 156223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00270 310 Pfam EamA-like transporter family 187 306 IPR000620 GO:0016020|GO:0016021
Car11g00270 310 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00111 Car-Chr9:551336 Car11g00270 Car-Chr11:1484703 3.99E-47 dispersed
Car11g00270 Car-Chr11:1484703 Car12g00412 Car-Chr12:2632584 1.14E-131 dispersed
Car11g00270 Car-Chr11:1484703 Car05g00227 Car-Chr5:1189261 9.82E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00270 - - cmos:111433746 591.652