Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00279 GTTCATGCAATGGCTGGAAGTGATCAAGATATGGCTGTTCACGAACCTCAAAAATGTGCCAATAATGCCGATCACCAACAAAGACCTTGCTTTGATCCTTCTTCTCTTCTTTCTCCCAAGGCTGTGCCGCCCATCTCGGTGGCCGCGGAGAGCGATCATGCTCTCCGTCGACCTCGCGGGCGGCCAGCTGGCTCGAAGAACAAGCCCAAACCCCCCATTATTGTTACCCGAGATAGCGCTAATGCTCTCCGGGCTCATGCCATTGAGGTTAGCTCTGGCTGTGATGTCAATGAGAGTCTCTCGAGCTTCGCTCGGAGGAAGCAGCGTGGCGTTTGTATTCTTAGTGGAAGTGGTTGTGTTGTTAATGTCACACTTCCACCGTTGGGGATCACCGGTCTGACAATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGTGGAGTCGTGGTGGGCGCGCTCATTGCCTCCGGCCCCGTTGTGATCATGGCAGCGACGTTCATGAACGCGACATTTGACCGTCTGCCATCTGACGACGACGAAGTGACAGCCGCCATGCATAGTCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTCGATGTTTCTGATCTGTATGGAACGCCACAGAACTTGATCACCAACAGCACTCTTCCGCCGGAATTATACTCTTGA 675 54.37 VHAMAGSDQDMAVHEPQKCANNADHQQRPCFDPSSLLSPKAVPPISVAAESDHALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSSFARRKQRGVCILSGSGCVVNVTLPPLGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDDEVTAAMHSQHYGQNGRSHHHLDVSDLYGTPQNLITNSTLPPELYS 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1529945 1530914 - Carg09110-RA Car11g00279 156232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00279 224 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 167 IPR005175 -
Car11g00279 224 MobiDBLite consensus disorder prediction 1 73 - -
Car11g00279 224 ProSiteProfiles PPC domain profile profile. 80 224 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00279 Car-Chr11:1529945 Car06g00967 Car-Chr6:7419418 7.51E-50 dispersed
Car10g00305 Car-Chr10:1501563 Car11g00279 Car-Chr11:1529945 1.32E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00279 - - csv:101219306 352.443