Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00281 ATGGGGAGTGGAACTCTCGTAGATGGTGTTCGTCGCTGGTTTCAACGTCGCATTACTTCCTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATTTAGGACGTAATTCTGATTCTGATTCTAATCTCAATTACCCATATAATAATAAGCTCGATTATCGATTATCTGAGGAGGAGGACGATGATGTCGACGACCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAGCGGACCAATCATTTCAGAGCTCCTCCTCCTCCTCCTCTTCCCGCTATAATGGATTCCCACAAGAAGGGTGGATTGGAAACAGAATTTTTCACAGAGTATGGAGAAGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGAAGCTACGGGGTTGTCGGTTCTGCCATTGATACACATACTGATGAGAAGGTCGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACGAGAATATTAAGAGAAATTAAACTCCTACGGCTGCTTCGACATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTCCACCAAGTAATCAAGGCCAACGATGATCTCACTCCTGAGCACCATCAATTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCTGACTGCAAACTGAAAATATGTGATTTTGGACTCGCTCGTGTGTCGTTTAATGATGCTCCATCTGCTATTTTCTGGACTGACTATGTTGCGACCCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTGATGACTGATGTGCTTGGCACGCCTTCAGCTGAGTCCATTGCTAGGATTCGAAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTCTGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGACCGTCCTACAGCTGAAGAGGCATTAGCGGATCCTTACTTTCATGGTTTGGCGAACGTGGATCGCGAACCATCAACTCAGCCGATTTCAAAACTTGAATTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAAGAATATCTCCGCAGCGGAGAACAAACTAGTTTCATGTACCCAAGTGGTGTCGATCGTTTCAAACGCCAGTTTGCACATCTGGAGGAACATTATGGTAAGGGTGAAAGAAGTTCTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAAGATGAGGCTGCACAGCACGAGGATTTAGAAGGAAGAAATGGTGTATATGTTGCTTCAACTCTTCAGAGTCCTCCAAGGTCGCAGCAAGGTGATGGTTCGGAAAATGCAAACAGTAACGAACAAAATGGACAAAGCAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATCAGTGCCTCTAAATGTATAGGTGTCAAACCAAAAAAGGAACTAGAGGAGGAACCGATTACGGAGGTTAACGACGAGGCAATTGACGGGTTGTCTCAGAAGGTTTCGGCCTTGCATACTTGA 1857 43.13 MGSGTLVDGVRRWFQRRITSSSSSSSSSSSSSSSSSSNLGRNSDSDSNLNYPYNNKLDYRLSEEEDDDVDDLDYSALKLIKVPKRTNHFRAPPPPPLPAIMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALCLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVCAPKDEAAQHEDLEGRNGVYVASTLQSPPRSQQGDGSENANSNEQNGQSKPNYSARSLLKSASISASKCIGVKPKKELEEEPITEVNDEAIDGLSQKVSALHT 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1535991 1540767 - Carg09108-RA Car11g00281 156234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00281 618 MobiDBLite consensus disorder prediction 585 618 - -
Car11g00281 618 MobiDBLite consensus disorder prediction 540 573 - -
Car11g00281 618 Pfam Protein kinase domain 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00281 618 ProSiteProfiles Protein kinase domain profile. 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00281 618 MobiDBLite consensus disorder prediction 18 52 - -
Car11g00281 618 ProSitePatterns Protein kinases ATP-binding region signature. 129 153 IPR017441 GO:0005524
Car11g00281 618 ProSitePatterns MAP kinase signature. 158 261 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car11g00281 618 MobiDBLite consensus disorder prediction 494 519 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00281 Car13g00832 CCT
Car11g00281 Car13g00832 ECH
Car10g00306 Car11g00281 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00047 Car-Chr4:248661 Car11g00281 Car-Chr11:1535991 0 dispersed
Car04g00932 Car-Chr4:5344755 Car11g00281 Car-Chr11:1535991 1.26E-70 dispersed
Car08g01053 Car-Chr8:7204705 Car11g00281 Car-Chr11:1535991 0 dispersed
Car11g00281 Car-Chr11:1535991 Car17g00253 Car-Chr17:1566217 0 dispersed
Car10g00306 Car-Chr10:1502928 Car11g00281 Car-Chr11:1535991 0 wgd
Car11g00281 Car-Chr11:1535991 Car13g00832 Car-Chr13:9009266 0 wgd
Car11g00281 Car-Chr11:1535991 Car18g00057 Car-Chr18:284844 3.47E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89163 PF00069 Pkinase 5.60E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00281 - - cpep:111793155 1132.09