Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00281 | ATGGGGAGTGGAACTCTCGTAGATGGTGTTCGTCGCTGGTTTCAACGTCGCATTACTTCCTCTTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATTTAGGACGTAATTCTGATTCTGATTCTAATCTCAATTACCCATATAATAATAAGCTCGATTATCGATTATCTGAGGAGGAGGACGATGATGTCGACGACCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAGCGGACCAATCATTTCAGAGCTCCTCCTCCTCCTCCTCTTCCCGCTATAATGGATTCCCACAAGAAGGGTGGATTGGAAACAGAATTTTTCACAGAGTATGGAGAAGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGAAGCTACGGGGTTGTCGGTTCTGCCATTGATACACATACTGATGAGAAGGTCGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACGAGAATATTAAGAGAAATTAAACTCCTACGGCTGCTTCGACATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTCCACCAAGTAATCAAGGCCAACGATGATCTCACTCCTGAGCACCATCAATTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCTGACTGCAAACTGAAAATATGTGATTTTGGACTCGCTCGTGTGTCGTTTAATGATGCTCCATCTGCTATTTTCTGGACTGACTATGTTGCGACCCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTGATGACTGATGTGCTTGGCACGCCTTCAGCTGAGTCCATTGCTAGGATTCGAAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTCTGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGACCGTCCTACAGCTGAAGAGGCATTAGCGGATCCTTACTTTCATGGTTTGGCGAACGTGGATCGCGAACCATCAACTCAGCCGATTTCAAAACTTGAATTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAAGAATATCTCCGCAGCGGAGAACAAACTAGTTTCATGTACCCAAGTGGTGTCGATCGTTTCAAACGCCAGTTTGCACATCTGGAGGAACATTATGGTAAGGGTGAAAGAAGTTCTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAAGATGAGGCTGCACAGCACGAGGATTTAGAAGGAAGAAATGGTGTATATGTTGCTTCAACTCTTCAGAGTCCTCCAAGGTCGCAGCAAGGTGATGGTTCGGAAAATGCAAACAGTAACGAACAAAATGGACAAAGCAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATCAGTGCCTCTAAATGTATAGGTGTCAAACCAAAAAAGGAACTAGAGGAGGAACCGATTACGGAGGTTAACGACGAGGCAATTGACGGGTTGTCTCAGAAGGTTTCGGCCTTGCATACTTGA | 1857 | 43.13 | MGSGTLVDGVRRWFQRRITSSSSSSSSSSSSSSSSSSNLGRNSDSDSNLNYPYNNKLDYRLSEEEDDDVDDLDYSALKLIKVPKRTNHFRAPPPPPLPAIMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALCLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVCAPKDEAAQHEDLEGRNGVYVASTLQSPPRSQQGDGSENANSNEQNGQSKPNYSARSLLKSASISASKCIGVKPKKELEEEPITEVNDEAIDGLSQKVSALHT | 618 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1535991 | 1540767 | - | Carg09108-RA | Car11g00281 | 156234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00281 | 618 | MobiDBLite | consensus disorder prediction | 585 | 618 | - | - | |
Car11g00281 | 618 | MobiDBLite | consensus disorder prediction | 540 | 573 | - | - | |
Car11g00281 | 618 | Pfam | Protein kinase domain | 123 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g00281 | 618 | ProSiteProfiles | Protein kinase domain profile. | 123 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g00281 | 618 | MobiDBLite | consensus disorder prediction | 18 | 52 | - | - | |
Car11g00281 | 618 | ProSitePatterns | Protein kinases ATP-binding region signature. | 129 | 153 | IPR017441 | GO:0005524 | |
Car11g00281 | 618 | ProSitePatterns | MAP kinase signature. | 158 | 261 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Car11g00281 | 618 | MobiDBLite | consensus disorder prediction | 494 | 519 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g00281 | Car13g00832 | CCT | |
Car11g00281 | Car13g00832 | ECH | |
Car10g00306 | Car11g00281 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00047 | Car-Chr4:248661 | Car11g00281 | Car-Chr11:1535991 | 0 | dispersed | |
Car04g00932 | Car-Chr4:5344755 | Car11g00281 | Car-Chr11:1535991 | 1.26E-70 | dispersed | |
Car08g01053 | Car-Chr8:7204705 | Car11g00281 | Car-Chr11:1535991 | 0 | dispersed | |
Car11g00281 | Car-Chr11:1535991 | Car17g00253 | Car-Chr17:1566217 | 0 | dispersed | |
Car10g00306 | Car-Chr10:1502928 | Car11g00281 | Car-Chr11:1535991 | 0 | wgd | |
Car11g00281 | Car-Chr11:1535991 | Car13g00832 | Car-Chr13:9009266 | 0 | wgd | |
Car11g00281 | Car-Chr11:1535991 | Car18g00057 | Car-Chr18:284844 | 3.47E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89163 | PF00069 | Pkinase | 5.60E-68 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00281 | - | - | cpep:111793155 | 1132.09 |