Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00289 | ATGCCGGATACTCCATCTTCGCCAAAGAGCGGTGGTCGGTTGGTGTTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCGTCATTCGTGGTGTCAATCTTGCTGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTCATCAAGATGGGGAAGCAAAAATTGAAGACACGGGTGATAAAGAAGGATGTCAATCCTGTATGGAATGAAGATCTAACACTTTCTATCAGTGACCCGAATATTCCCATTAAGCTGACTGTTTACGACCACGACAAATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTTGATATCAAATCATTTATAGAAGCTCAAAAGATGAACTTGAAAAATCTTCCTAGTGGAACGACAATCTCACGAACGCTACCGGGCAGGCACAACTGTTTTGCTGAAGAGAGCTGCGTCATCTGGAAAGACGGTCAAGTTATCCAAGATATATACCTTAGACTGAAAAGGGTCGAATGCGGAGAAGTCGAAATTCAGCTGCAGTGGATTGATCTTCCAAACGCCAAAGGTTAA | 543 | 43.46 | MPDTPSSPKSGGRLVLMENLLGLLRIRVIRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKKDVNPVWNEDLTLSISDPNIPIKLTVYDHDKFSKDDKMGYAEFDIKSFIEAQKMNLKNLPSGTTISRTLPGRHNCFAEESCVIWKDGQVIQDIYLRLKRVECGEVEIQLQWIDLPNAKG | 180 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1584944 | 1587709 | - | Carg09100-RA | Car11g00289 | 156242 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00289 | 180 | ProSiteProfiles | C2 domain profile. | 5 | 119 | IPR000008 | - | |
| Car11g00289 | 180 | Pfam | C2 domain | 22 | 113 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g00289 | Car-Chr11:1584944 | Car14g00769 | Car-Chr14:4397737 | 7.88E-84 | dispersed | |
| Car18g00547 | Car-Chr18:5140047 | Car11g00289 | Car-Chr11:1584944 | 1.69E-30 | dispersed | |
| Car18g00794 | Car-Chr18:9040590 | Car11g00289 | Car-Chr11:1584944 | 7.87E-38 | dispersed | |
| Car10g00310 | Car-Chr10:1521794 | Car11g00289 | Car-Chr11:1584944 | 1.23E-105 | wgd | |
| Car11g00289 | Car-Chr11:1584944 | Car13g00824 | Car-Chr13:8951867 | 9.21E-85 | wgd | |
| Car11g00289 | Car-Chr11:1584944 | Car18g00066 | Car-Chr18:340416 | 1.51E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00289 | - | - | csv:101220972 | 305.834 |