Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00289 ATGCCGGATACTCCATCTTCGCCAAAGAGCGGTGGTCGGTTGGTGTTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCGTCATTCGTGGTGTCAATCTTGCTGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTCATCAAGATGGGGAAGCAAAAATTGAAGACACGGGTGATAAAGAAGGATGTCAATCCTGTATGGAATGAAGATCTAACACTTTCTATCAGTGACCCGAATATTCCCATTAAGCTGACTGTTTACGACCACGACAAATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTTGATATCAAATCATTTATAGAAGCTCAAAAGATGAACTTGAAAAATCTTCCTAGTGGAACGACAATCTCACGAACGCTACCGGGCAGGCACAACTGTTTTGCTGAAGAGAGCTGCGTCATCTGGAAAGACGGTCAAGTTATCCAAGATATATACCTTAGACTGAAAAGGGTCGAATGCGGAGAAGTCGAAATTCAGCTGCAGTGGATTGATCTTCCAAACGCCAAAGGTTAA 543 43.46 MPDTPSSPKSGGRLVLMENLLGLLRIRVIRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKKDVNPVWNEDLTLSISDPNIPIKLTVYDHDKFSKDDKMGYAEFDIKSFIEAQKMNLKNLPSGTTISRTLPGRHNCFAEESCVIWKDGQVIQDIYLRLKRVECGEVEIQLQWIDLPNAKG 180
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1584944 1587709 - Carg09100-RA Car11g00289 156242
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g00289 180 ProSiteProfiles C2 domain profile. 5 119 IPR000008 -
Car11g00289 180 Pfam C2 domain 22 113 IPR000008 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00289 Car-Chr11:1584944 Car14g00769 Car-Chr14:4397737 7.88E-84 dispersed
Car18g00547 Car-Chr18:5140047 Car11g00289 Car-Chr11:1584944 1.69E-30 dispersed
Car18g00794 Car-Chr18:9040590 Car11g00289 Car-Chr11:1584944 7.87E-38 dispersed
Car10g00310 Car-Chr10:1521794 Car11g00289 Car-Chr11:1584944 1.23E-105 wgd
Car11g00289 Car-Chr11:1584944 Car13g00824 Car-Chr13:8951867 9.21E-85 wgd
Car11g00289 Car-Chr11:1584944 Car18g00066 Car-Chr18:340416 1.51E-83 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00289 - - csv:101220972 305.834