Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00322 | ATGGCCGTCGACCTCGCAGCGTTTCCGGCCACCATTGACGACCAAACCGCCATCCAAGATGCCGCCTCCGCCAGTTTACAGAGCATGGAGAATCTAATCCGTCTCTTATCCAAACAACAACCCACTCAAAAAATCGCCGATCTCGATTGCTCTCAAGTCACCGATTTCACCGTCTCCAAATTCAAGCGATTCATTTCCCTCCTCAACCGCACCGGACATGCCCGGTTCCGTCGCGGTTCTTCCTCTGTTACCGATTCCTCTGTTTCCGTTCTCAATTCTCTCGATCCACTTCCCAGTTCCTCCACTATTGACTTCCTTAAATCGCCCGATTCCAAGGCTCCGACTGAGTCCACTACGACGTCGTCTCTCATGTCCACGATCACCGGCGACGGCAGCGTTTCCAACGAAAAGCTTGGTCTGTCACTCTTCACGCCGCCACCGCCACTGCCGGCGGTTTCCTCTGGTAAACCGCCCCTGTCGGCGAAGAGGAAGTGCGATGATAGATCCCGATTTGGTTGCAAGATCAATTCCAAGGAGTGTCACTGCGCGAAGCGAAGGAAATCGGGAGTGAAAAAAACCGTACGAGTTCCGGCGATCAGTTCTAAGATCGCCGAGATACCTTCCGACGAGTATTCTTGGAGAAAGTACGGCCAAAAGCCCATCAAAGGCTCGCCGTATCCGAGAGGTTATTACAGATGCAGCGCCGTCAAAGGATGTCCGGCGAGGAAAAAAGTTGAAAGAGCTCGCGATGATCCGGCGATGCTCGTCGTAACTTACGACGGAGATCACCGACACCCGCCGGCCACGGTGCCGAGAGCGGCGGCCGATGCCAGCGTTGGCTTCGTTTCCCAGACGTGTTGA | 861 | 54.7 | MAVDLAAFPATIDDQTAIQDAASASLQSMENLIRLLSKQQPTQKIADLDCSQVTDFTVSKFKRFISLLNRTGHARFRRGSSSVTDSSVSVLNSLDPLPSSSTIDFLKSPDSKAPTESTTTSSLMSTITGDGSVSNEKLGLSLFTPPPPLPAVSSGKPPLSAKRKCDDRSRFGCKINSKECHCAKRRKSGVKKTVRVPAISSKIAEIPSDEYSWRKYGQKPIKGSPYPRGYYRCSAVKGCPARKKVERARDDPAMLVVTYDGDHRHPPATVPRAAADASVGFVSQTC | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1758429 | 1759507 | - | Carg09066-RA | Car11g00322 | 156275 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00322 | 286 | Pfam | Plant zinc cluster domain | 162 | 204 | IPR018872 | - | |
Car11g00322 | 286 | Pfam | WRKY DNA -binding domain | 209 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g00322 | 286 | ProSiteProfiles | WRKY domain profile. | 202 | 268 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g00322 | 286 | MobiDBLite | consensus disorder prediction | 102 | 126 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00344 | Car11g00322 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00322 | Car-Chr11:1758429 | Car03g00867 | Car-Chr3:6952711 | 2.40E-65 | dispersed | |
Car10g00344 | Car-Chr10:1703899 | Car11g00322 | Car-Chr11:1758429 | 7.62E-119 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4250 | PF03106 | WRKY | 1.00E-25 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00322 | - | - | mcha:111006845 | 389.808 |