Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00342 ATGGCCGGAAAACTCAGTCTCGAGGAAATCAAGAACGAAACTGTTGACCTGGAGAAAATCCCGATCGAGGAAGTATTTGAGCTACTGAAATGTGGCCCCGAAGGTCTGTCAACTCCGGAGGGGGAAAACAGGCTCCAGATATTCGGTCCCAACAAATTAGAAGAGAAAAAGGAAAGCAAATTTCTGAAGTTCTTGGGGTTCATGTGGAATCCCTTGTCTTGGGTTATGGAAGCCGCAGCTTTGATGGCTATTGCTTTGGCTAATGGGGATGGACAGCCTCCAGATTGGGAAGACTTTGTGGGTATTATATGTTTGCTGGTCATCAACTCCACTATCAGTTTCATTGAAGAAAATAACGCTGGGAATGCTGCTGCTGCTCTCATGGCTGGCCTTGCCCCTAAAACTAAGGTGCTGAGAGATGGGAAATGGAGCGAGCAGGATGCTGCAATTTTGGTTCCAGGAGATATCATTAGTGTAAAGTTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTGGAGGGCGATCCTTTGAAAGTTGATCAATCTGCATTGACAGGAGAATCACTTCCTGTTACCAAGAATCCAGGGGATGGAATCTTCTCTGGTTCAACTTGTAAACAAGGAGAAATCGAAGCTGTTGTTATTGCCACTGGTGTTCATACCTTCTTTGGAAAAGCAGCACATCTTGTAGACAGCACCCACCAAGTTGGCCATTTCCAAAAGGTGCTCACAGCAATTGGGAATTTCTGTATTTGTTCCATTGCTTTAGGAATGCTGGTTGAGATCATTGTCATGTACCCAATTCAACACCGAAGTTACCGCGACGGTATCGACAATCTGCTCGTTCTCTTGATCGGAGGAATACCGATTGCCATGCCAACAGTGTTGTCTGTGACAATGGCTATTGGATCTCATAAGCTGTCCCAACAAGGCGCTATCACTAAGCGGATGACTGCTATTGAAGAGATGGCTGGTATGGATGTCCTGTGCAGTGATAAAACAGGAACATTGACTCTAAACAAGCTTAGTGTTGATGTCAACTTGGTTGAGGTTTTTGCTAATGGTGTGGATAAACAGCATGTGATATTGCTTGCTGCTAGAGCTTCTCGAACTGAAAATCAAGATGCTATTGATGCTGCTATTGTGGGAATGCTAGCTGATCCTAAGGAGGCACGAGCAGGCATAAAAGAAGTGCATTTCTTCCCTTTTAATCCTGTGGATAAGAGAACTGCATTAACTTACATTGATTCCAATGGTAATTGGCATAGAGCAAGCAAAGGTGCTCCAGAACAGATCTTGACGCTTTGCAACTGCAAGGCGGATGTTAAGAAGAAGGCTCATGCTGTTATCGACAAATTTGCCGAACGTGGTCTTCGCTCGTTGGCTGTTGCGAGACAGGAAGTACCTGAGAAAAGAAAAGAAAGTCCTGGAAGTGCATGGCAGTTCGTTGGTTTATTGCCTCTATTTGATCCTCCAAGGCATGACAGTGGAGAAACCATCAAAAGAGCTCTCCATTTAGGTGTGAATGTCAAGATGATTACTGGTGATCAGCTCGCCATCGCCAAAGAGACGGGTCGACGACTCGGAATGGGGACGAACATGTACCCATCTGCATCATTACTTGGTCAACACAAGGATGAAAGCATTGCAGGTCTTCCTATAGAAGAGTTAATTGAAAAGGCAGATGGATTTGCTGGAGTTTTTCCCGAGCACAAGTACGAGATCGTGAGGAAGTTGCAAGAGAGGAAACATATTTGTGGAATGACCGGAGACGGCGTAAACGACGCTCCGGCACTGAAGAAGGCTGACATTGGAATAGCAGTTGCTGATGCTACTGATGCTGCTAGAAGTGCTTCTGATATAGTCCTTACAGAGCCTGGCTTGAGTGTTATCATCAGTGCTGTTCTTACAAGTAGAGCTATCTTCCAAAGAATGAAGAATTACACAATTTATGCAGTTTCGATCACTATACGTATCGTGTTTGGTTTCATGCTTATTGCCCTCATATGGAAGTTCGACTTCTCTCCTTTCATGGTTTTGATCATTGCCATTCTAAATGATGGCACAATCATGACCATCTCAAAGGATAGAGTGAAGCCATCTCCATTACCTGATAGCTGGAAATTGAGAGAGATATTTGCTACTGGCGTTATGCTTGGAGGTTACTTGGCTTTGATGACTGTCATATTCTTCTGGATAATGAGAGAGACAGACTACTTCCCAGAGAAATTTGGTGTAAGATCTATAAAGGACAGTCCTAAAGAAATGATGGCTGCTCTTTACCTACAAGTGAGCATTGTCAGCCAGGCTTTGATCTTTGTGACTCGATCGCGAAGCTGGTCGTACTCCGAACGCCCTGGCTTGCTACTCATGGCTGCTTTCATGGTTGCACAACTGGTTGCAACACTCATAGCAGTATATGCAAATTGGGGATTTGCAAAGATCAAGGGAGTTGGATGGGGATGGGCTGGCGTAGTCTGGCTTTACAGTATTATTTTCTACATTCCATTAGACTTCATCAAGTTTGCTATTCGATATGCCTTAAGTGGCAAGGCTTGGCTTAACATGCTAGATAACAAGACCGCCTTTACGACGAAGAAAAACTATGGAATGGCCGAAAGAGAAGCTCAATGGGCTGCCACTCAAAGGACCTTACATGGCCTCCAACCAGCCCCAGAAAGAACCAGCCTGTTCATTGAAAAGAATAGCTACAGAGAGCTGTCCGAGATCGCCGAGCAGGCCAAGAGACGAGCCGAGATTGCTAGGCTTAGGGAGCTCAACACTCTGAAGGGTCATGTTGAATCAGTGGTGAAACTGAAAGGGCTGGATATTGATACAATCCAACAGCATTATACTGTGTAG 2862 44.97 MAGKLSLEEIKNETVDLEKIPIEEVFELLKCGPEGLSTPEGENRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAALMAIALANGDGQPPDWEDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDIISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDGIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTHQVGHFQKVLTAIGNFCICSIALGMLVEIIVMYPIQHRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDVNLVEVFANGVDKQHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIKEVHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKADVKKKAHAVIDKFAERGLRSLAVARQEVPEKRKESPGSAWQFVGLLPLFDPPRHDSGETIKRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPIEELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVMLGGYLALMTVIFFWIMRETDYFPEKFGVRSIKDSPKEMMAALYLQVSIVSQALIFVTRSRSWSYSERPGLLLMAAFMVAQLVATLIAVYANWGFAKIKGVGWGWAGVVWLYSIIFYIPLDFIKFAIRYALSGKAWLNMLDNKTAFTTKKNYGMAEREAQWAATQRTLHGLQPAPERTSLFIEKNSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 953
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1865736 1873994 + Carg09046-RA Car11g00342 156295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00342 953 Pfam haloacid dehalogenase-like hydrolase 326 603 - -
Car11g00342 953 Coils Coil 904 924 - -
Car11g00342 953 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Car11g00342 953 Pfam E1-E2 ATPase 132 309 - -
Car11g00342 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00450 Car11g00342 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00342 Car-Chr11:1865736 Car12g00850 Car-Chr12:8294040 0 dispersed
Car11g00342 Car-Chr11:1865736 Car05g00639 Car-Chr5:3866859 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00342 K01535 - csv:101221783 1740.32