Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00358 ATGTTGATACTAGGAGCCGCTCTTGATCCATCAAAATGCAGTAAGACGAGCATGGAGGAGAAAAGAAATTTAGTCTATGAAATATCAGATCAGCCACATGCTTCTGAACTGCTTCAGTCCTGGAGTCGTCAAGAGATTCTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGAAAATATACCGGATTAACAAAACTGAAAATAGTCGAGAACCTTCTGAAGATTGTTAGTGAAAAGAAATCAGGGTCAACTGAGAATGTAGCAGACCTTGACCAGCAATCTTCTTCACCCTATCTTTCTCCAAAGATTACCAAAAAGCAAAGAAAAATTGATCAGCCATCACGACTACCAGTTCCGGAAAACAATATTCCTATCAGTAGCATTAGGAGTGACTCAAATATTGCAGTTTACTGCAGAAATTCAGCATGCAAGGCTACCTTAAATGAAGATGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGCTATCAATATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGGCACTTCATGTGGTTTGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGAATTTCTAAAGGACAGCAGGTTGGAATTGAAGGGACTTTCTATTGTCTATCATGTGGAAAAGTCAACGACTTGCTTGGGAGTTGGAGGAAACAATTGATGAAGGCAAAGGAAACCCGAAGGGTGGATATACTGTGTTACCGCATCTCTTTAGCCAAAAAGATTTTGAGTGAAGGTGAAAAGTATCAAGATGTTTGTCGGATCGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGAGGCATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCACGTTAGCCATTGATACACTGGACTCCTTGCTCTCCAAGATCTTGCATCAATCGCCCATTTCCATTATACAAGACACAAATTTGGTAGCTACAAACTTATTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTATGGGTACCGAAGATGTTTCTTCTGGAGAAACTGTTGGTTACAGGCTATGGCATCGAAAGGCATGTGATATAGATTACCCTATAGAGCCAACTTGCATCTTGTCTCAACCCAATTTGAGGTTTGTCGTCCGAGGACTGACCCCATCTTCAGAATATTATTTCAAAGCCATTTCCTTTAATAATGGGACAGGAGATTTGGGGATGTGTGAAGTTCAGATCTCAACTGCTAGTGCTCGGGAGGATCACCCAGGATGCTTGGTGATTGAAAGAAGTCAGAGTTCGGTTACCAACGTTAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACAAACAATGTAATGCCTTGTAGCGACCAGACTGATAGTCAAACAGAGAACTATCTTTCTTATTGCAAAGATCCTAACAAGATTATCACTGCTAACCTGTCTAAAGATGCAATAAACTGCACTGATGTCGGTGGAGGAGAAACAGCAAAAGATTCTGTTTCTTTGTTGGATGAGAAACATGTTACAAAGAAAAGTGGCATGCTGCCTGATCCTAATGTTTCAAAACTTGAAGACAAACAATGCTCTGAGGTTCATATCATTGAAGATACAAGCGTAAATAACGGGTCAAATTCTGCCGTTCAAGAAGGAACTAAATGCCCACCATTTGTTAACAGCTCTGGGGCTGGATTGCCAGCTACTCCTTGCAAGATGGAAATACTTAAGGATGTTCTTGGAAGGAGTGGACGATCGAAGTCCAGTGCCAAGGATCGAGAAAACGGGTCTGGGGGAGACAAACTCCGACATGGCAGCAAATCTAAGAAGAGAAGTGCAGAGATTCGAGATGCTGATTGTACGGCAAATGGTATTTCAGATAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTAGAATGCGAGGGACACATAGATAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGTGCCACAGCCCAAGAAGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCTCTTGCAGAGCAACTTGTGGACACCTTTTCAGAATGCATTTCAAGCAAGAAAACATGTGCTGTGCCGGCTGGATTCTGCATGAAGCTTTGGCATTGA 2202 41.69 MLILGAALDPSKCSKTSMEEKRNLVYEISDQPHASELLQSWSRQEILEILCAEMGKERKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDQQSSSPYLSPKITKKQRKIDQPSRLPVPENNIPISSIRSDSNIAVYCRNSACKATLNEDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGIEGTFYCLSCGKVNDLLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSLLSKILHQSPISIIQDTNLVATNLLRFEDVDATYLTVVMGTEDVSSGETVGYRLWHRKACDIDYPIEPTCILSQPNLRFVVRGLTPSSEYYFKAISFNNGTGDLGMCEVQISTASAREDHPGCLVIERSQSSVTNVSELSNPSSVEDETNNVMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETAKDSVSLLDEKHVTKKSGMLPDPNVSKLEDKQCSEVHIIEDTSVNNGSNSAVQEGTKCPPFVNSSGAGLPATPCKMEILKDVLGRSGRSKSSAKDRENGSGGDKLRHGSKSKKRSAEIRDADCTANGISDKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATAQEVRIVKAFVDNFIEDPSALAEQLVDTFSECISSKKTCAVPAGFCMKLWH 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1959725 1962893 - Carg09030-RA Car11g00358 156311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00358 733 MobiDBLite consensus disorder prediction 601 622 - -
Car11g00358 733 MobiDBLite consensus disorder prediction 459 478 - -
Car11g00358 733 MobiDBLite consensus disorder prediction 84 102 - -
Car11g00358 733 Pfam PHD - plant homeodomain finger protein 138 256 IPR032881 -
Car11g00358 733 MobiDBLite consensus disorder prediction 84 117 - -
Car11g00358 733 MobiDBLite consensus disorder prediction 601 629 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00633 Car11g00358 CCT
Car10g00371 Car11g00358 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00484 Car-Chr5:2803134 Car11g00358 Car-Chr11:1959725 3.24E-18 dispersed
Car05g01244 Car-Chr5:11626845 Car11g00358 Car-Chr11:1959725 5.14E-112 dispersed
Car10g00555 Car-Chr10:2810551 Car11g00358 Car-Chr11:1959725 4.55E-26 dispersed
Car11g00358 Car-Chr11:1959725 Car12g00187 Car-Chr12:1155044 9.55E-18 dispersed
Car19g00674 Car-Chr19:7960753 Car11g00358 Car-Chr11:1959725 9.68E-06 dispersed
Car10g00371 Car-Chr10:1847121 Car11g00358 Car-Chr11:1959725 0 wgd
Car11g00358 Car-Chr11:1959725 Car05g00633 Car-Chr5:3806552 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00358 - - csv:101220456 1208.36