Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00373 ATGCAGAGGCAGACAAGATATATGGAGAGGACGAACTCCATGAGAGAAAAAAGGGGCTTGGAGGGTGGAGATGATGAGCTGCCGGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAAGTGGATAGTTTACAAAAGCTCTTCTCATCAATGGAACCAATACTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGCCCTGACGGAAGAAACTTGCAACTGCATTTTAGGTCTAGATTGTCTCTTCCCCTGTTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGCTTGATGCCAACACAGGTCGTGTAGTAACATCTGGACCTGAATCCTTGTCAAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAGGTCATGTGGTAAAAGAGCGCGAAGGAAAGAGGCCTCTATTGACCGGTGACCTGCAGGTTTCCCTCAAGGAAGGTGTTGGAACACTAGGGGATTTGACCTTCACTGATAACTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGGTTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTTCGTATTCGAGAAGCAAAAACTGAAGCTTTTACAGTTAAAGATCATCGAGGAGAACTGTATAAAAAACATTACCCACCTGCATTAAACGATGATGTGTGGAGATTAGAGAAGATTGGAAAGGATGGTTCCTTTCACAAACGACTAAATAAAAGTGGAATAGTCACCGTCGAAGACTTTCTCCGACTGGTAGTTCGAGATTCTCAAGGACTACGAAGTATCCTTGGAAGTGGTATGTCTAATAAGATGTGGGAGGCTCTCTTAGAACATGCTAAGACCTGTGTCCTGAGCGGGAAGTTGTATATTTATTATCCAGAGGAATCCAGAAATGTTGGTGTTGTTTTTAACAATATCTACGAGCTCAACGGCCTGATTGCAGAGGAACAATACTTTCCTGCTGATTCTCTGTCTGAGAGCCAGAAGGTTTATGTAGATACACTAGTGAATAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGGAAGTCACTTTTGAGCTCTAAGAAGCCAAAGAAGTCCAATGCATCCCGAAATGACTTTCAAGGAGGTCATCTTGATCTTTCTAATACTCATGTGTCAGTGCCCCGCATGCCAGTATCAGTTCAGCCTCAGCAGCCTATCGTGGATTCAGGACTCTCAGTTGCAGGGTATAATGATAATACAGCCACAAGATATTCAACCCAACCTCAGTTTGTGAATTCAACTTCTCGACCCCAATTTGACAACTCCTCATTTACTCCAAATGAGTTGCTCGGCAATTCTAACCACGTTCATGTCACCAGAAATGACCCTAGTACTTTTGGTTTGGCTCTTGGTCCTCCGCAAGCATCGTCATCTTCAGGTTTTCAGCCGCTTGGTTCTTCTATTCAGGAATCTAATATGAATCCATTTGACTGGTCAAACAATAGAGACAAGGTAGTGGATGACTTCTTTTCAGAGGATGAGATTCGTATGAGAAGTCACGAGATGCTGGAAAATGAAGATATGCAACAATTGTTGCGAATGTTTAGCATGGGTGGCCATTCATCTGTTAACGTCCATGATGAGAGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTTGATGATCGAAACCGTCCTGGAAAAGCTGTGGTAGGTTGGTTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCCGAGAGACGTGCACAGATTGTCGAGTTGGATGAGGAGTAG 1911 43.59 MQRQTRYMERTNSMREKRGLEGGDDELPERKRPALASVIVEALKVDSLQKLFSSMEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGRVVTSGPESLSKLDIVVLEGDFNNEDDEDWTEEEFEGHVVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLNKSGIVTVEDFLRLVVRDSQGLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEESRNVGVVFNNIYELNGLIAEEQYFPADSLSESQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKKPKKSNASRNDFQGGHLDLSNTHVSVPRMPVSVQPQQPIVDSGLSVAGYNDNTATRYSTQPQFVNSTSRPQFDNSSFTPNELLGNSNHVHVTRNDPSTFGLALGPPQASSSSGFQPLGSSIQESNMNPFDWSNNRDKVVDDFFSEDEIRMRSHEMLENEDMQQLLRMFSMGGHSSVNVHDESFSFPSFMPSPMPNFDDRNRPGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDEE 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2042077 2048792 - Carg09014-RA Car11g00373 156326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00373 636 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Car11g00373 636 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Car11g00373 636 MobiDBLite consensus disorder prediction 393 417 - -
Car11g00373 636 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Car11g00373 636 MobiDBLite consensus disorder prediction 9 29 - -
Car11g00373 636 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00386 Car11g00373 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00955 Car-Chr5:9165421 Car11g00373 Car-Chr11:2042077 5.24E-66 dispersed
Car10g00138 Car-Chr10:652509 Car11g00373 Car-Chr11:2042077 1.37E-106 dispersed
Car11g00113 Car-Chr11:646407 Car11g00373 Car-Chr11:2042077 1.56E-93 dispersed
Car11g00373 Car-Chr11:2042077 Car13g00849 Car-Chr13:9091912 3.56E-99 dispersed
Car10g00386 Car-Chr10:1917225 Car11g00373 Car-Chr11:2042077 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00373 - - cmo:103494282 1140.95