Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00378 | ATGGGGATCGCTAATCTCTCATACGAGGCATGCCGCCATAAGAGACTCGAAGAAAACAAGAAGCGGATGGAAGCCCTAAATCTGCCTTTGCTTTCTCAAGCTCTCCTCCATTCTTCCCCTTCCAAATCCTCGCCTAGTAAGCTCGCCAAGCCTCGCGTGACGCAGAAACAACTCGTTGTTGTGAGGAGATCCAGTCGCATAGCGAAACAATCCGCCCCCGTTTACGCCGAAGTTGTTGTAAATCGTGTGGTGATTCCTAGAAGGATCTCCAATGCTACAGATCTTTCAAATCGAGTTTATTCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCTGAGCGATTACAATCTGGATTAGAGACGAATTATCCCAACTTTATAAGGTCGATGCTTCCATCTCATGTTAGTGGTGGATTCTGGCTGGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAATCGCGATGGAATTGTGACATTAATAGATGAAGATGGAGATGAATATCCAACAGTATATTTAGCACGAAAAACAGGACTCAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCTGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAACGTGCAAGGTGATTGTTTTCCCTTCAAGTTAG | 657 | 44.6 | MGIANLSYEACRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVVVRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYPNFIRSMLPSHVSGGFWLGLPSHFCKTHLPNRDGIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKVIVFPSS | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2074794 | 2075895 | + | Carg09009-RA | Car11g00378 | 156331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00378 | 218 | Pfam | B3 DNA binding domain | 127 | 212 | IPR003340 | GO:0003677 | |
Car11g00378 | 218 | ProSiteProfiles | B3 DNA-binding domain profile. | 127 | 218 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00378 | Car-Chr11:2074794 | Car19g00463 | Car-Chr19:6314735 | 9.01E-70 | dispersed | |
Car11g00378 | Car-Chr11:2074794 | Car12g00498 | Car-Chr12:3133682 | 3.13E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4258 | PF02362 | B3 | 1.10E-12 | CL0405 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00378 | - | - | csv:101205473 | 350.517 |