Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00415 | ATGTCGAGCTGCATCGATATTGCACCTGAACAGCTCTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGATATTGTGACAGTCCGTTGTGGGCACTGTACAAATCTATGGTCCGTGAATATGGCTGCTGCATTTCAGTCACTTTCCTGGCAAGATGTTCAGGTTCCAAATTACAATCTTTACACTTCTTGTGGACCTGATTTTCAAGGGGATTTTGGATCTTCATCCAAATGTGATAACAATAAGATGCAAATTCGAGATTCCGCTACAATTGCAGCTGAGGAACGGGAAATCCGAAGGATCAAGGCCAAGAACCCTGAGATTAGTCACAGGGAAGCTTTCAGCACAGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTCATGTTTGAAACCAATAATCAAGTGAAGATTGATGATGGTTCTGAGCGTTTGATGTCAATGGCTGCACTATTAAACAAATGA | 507 | 42.8 | MSSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQVPNYNLYTSCGPDFQGDFGSSSKCDNNKMQIRDSATIAAEEREIRRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQVKIDDGSERLMSMAALLNK | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2339258 | 2341566 | + | Carg12122-RA | Car11g00415 | 156368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00415 | 168 | Pfam | YABBY protein | 9 | 71 | IPR006780 | GO:0007275 | |
Car11g00415 | 168 | Pfam | YABBY protein | 107 | 142 | IPR006780 | GO:0007275 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00415 | Car-Chr11:2339258 | Car15g01044 | Car-Chr15:8220769 | 9.33E-37 | dispersed | |
Car10g00501 | Car-Chr10:2522223 | Car11g00415 | Car-Chr11:2339258 | 8.05E-85 | wgd | |
Car11g00415 | Car-Chr11:2339258 | Car12g01175 | Car-Chr12:11290190 | 1.19E-63 | wgd | |
Car11g00415 | Car-Chr11:2339258 | Car05g01205 | Car-Chr5:11394486 | 2.82E-72 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4260 | PF04690 | YABBY | 1.10E-25 | CL0114 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00415 | K25796 | - | csv:101215951 | 289.656 |