Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00431 ATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGACCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGCTGGGGTAATATCTTCTTCCACTGGCTCAAATCCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAAATTTCTTTATTTTAGTTCTTTTACTCTGTTCCTGCTTTCGACTATCAAGGATTTGTTTGTTTCCTATTCTATTTTCTTATGGTTTTAATCAATCTGATAGGATTCCCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAGCTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAATTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTAGTTATTGTTTTCATCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATATGTGGTGGAGGATCTACACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAA 1095 42.1 MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2411713 2414461 + Carg12138-RA Car11g00431 156384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00431 364 Pfam RING-variant domain 51 106 IPR011016 GO:0008270
Car11g00431 364 MobiDBLite consensus disorder prediction 9 31 - -
Car11g00431 364 MobiDBLite consensus disorder prediction 1 42 - -
Car11g00431 364 ProSiteProfiles Zinc finger RING-CH-type profile. 43 134 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00431 Car-Chr11:2411713 Car14g01037 Car-Chr14:9146856 6.22E-08 dispersed
Car03g00714 Car-Chr3:6204067 Car11g00431 Car-Chr11:2411713 3.76E-57 transposed
Car10g00537 Car-Chr10:2695129 Car11g00431 Car-Chr11:2411713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00431 - - cmax:111465033 595.89