Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00432 | ATGGAGGGCCTCAGAAACAGAGGAGTTTTCAGGGTTTCTGTTTGTGGGCAACAGGAGCTCGAGCAACTCTCTAGAGATGGCAGTCAGTATAGCCTCACCACCGGTGTATTGCCGTCTCTTGGAGCTAGAAGCAACCGGAGAGTTAAGCTTCGGTGGTTTATCATATCGCCCTATGACCGTCGATACAGGATCTGGGAGACATTTCTAGTTGTTTTAGTGGTTTATACAGCTTGGGTCTCGCCGTTCGAGTTTGGATTCCTTAAGAAACCCCAATCGCCACTCTCAGTTACAGACAATGTGGTTAATGGGTTTTTTGCTGTGGATATTGTTCTTACATTCTTTGTGGCTTATCTTCATAAAGCCACCTATTTACTTGTGGATGATCCAAAGAAGATAGCTCTAAAGTATGCACGTTCATGGCTAATCTTTGATGTCATATCAACAATCCCTTCCGAACTTGCTCAGAAAATTTCCCCACCACCGCTCCGTTCTTATGGGTTATTCAACATGCTTCGTTTATGGCGTCTAAGAAGAGTCAGTGCTCTGTTTTCCAGATTGGAAAAAGATAAGAACTACAACTACTTCTGGGTTCGATGTGCGAAGCTCATTTGTGTTACTCTCTTTGCGGTTCATTGTGCTGCATGTTTCTATTATCTTATTGCTGCTCGTAATAGTGACCCGACTAAAACATGGATTGGAGCGTCTATTGATGACTTTCTTAATCAAAGTTTGTGGGTTAGATATGTCACTTCCATTTACTGGTCCATCACTACCTTAACCACTGTTGGGTATGGCGATTTGCATCCTGTGAATTCAAAGGAGATGATTTTTGACATCTTCTACATGCTTTTCAATCTTGGCTTGACAGCATATTTGATTGGAAATATGACCAACTTAGTTGTTCATGGCACCGGTAGAACTAGAAAATTTAGAGATACCATTCAAGCGGCTTCGAGTTTCGCTCATCGGAATCAACTTCCTCCCCGTTTGCAAGATCAAATGCTTGCACATTTGTGTCTAAAGTTCAGGACTGACTCTGAGGGATTGCAGCAGCAAGAAACTCTTGACTCCTTACCTAAAGCCATCCGATCGAGCATTTCTCATTATCTGTTCTATTCTCTAGTAGACAAAGTCTACTTGTTTCGTGGTGTTTCGAATGATCTACTTTTTCAACTGGTTTCAGAAATGAAGGCAGAGTACTTTCCTCCAAAGGAGGATGTGATTTTACAAAACGAAGCGCCGACCGACTTTTACATTCTTGTCACCGGTGCTGTGGATTTGCTGGTTCTCAAGAATGGAGTTGAACAGCTTGTTGGAGAGGCTAGAACCGGGGATCTTTGTGGTGAGATTGGGGTGTTATGTTACAGGCCACAACTATTTACGGTGCGCACGAAGCGATTGAGTCAGTTGCTGCGTCTGAATCGTACTGCTTTCCTTAATATCGTTCAATCTAATGTCGGCGATGGGACCATAATCATGAACAATCTTCTTCAGCATTTAAGGGACCTCAAAGACAAGGACCCCATCATGGAAGGGGTATTGTTGGAGACAGAGAACATGCTAGCTAGAGGCAGAATGGACCTACCACTCAGTCTTTGCTTTGCAACACTTAGAGGAGATGACTTGCTTTTACACCAGCTTTTGAAACGAGGTCTCGATCCAAATGAATCGGACAACAACGGGCGTACTTCACTCCACATAGCAGCATCAAATGGAAACGAGAACTGTGTGCTTCTGTTACTGGACTATGGAGCTGATCCCAATAGCAGAGATTCTGATGGAAGTGTGCCATTGTGGGAGGCGATACTAGGTGGCCATGAGCCAGTTATTCAGCTACTTATGGACAATGGAGCTAATCTTCGATCGGGGGACGTGGGTCAATTTGTGTGCACTGCTGCAGAGCAAAACAACCTCCAGTTGCTCAAGGAGATTGTCCGATATGGAGGAGACGTTAGGAGTGCCAAGATCAATGGAACGACAGCTTTACATGTTGCTGTTTGTGAAGACAACATTGAGATTGTTAAGTTCCTTCTTCAACAAGGAGCTGATATTGACAAAGCTGATGTTCATGGATGGACTCCAAGAGATCTAGCAGACCAACAGGGGCATGAAGAAATTAAAAATCTCTTCCAGACAACCAAAGAGTCAAAAACTCAATCTGTCATTGCCATTCCCGAGAAGCAGACTGGGATTCGCTTCCTTGGAAGATTTACAAGCGAGCCTACGATTCGCCCCGTACCTCAGGAAGGAAATGATGGTTCATTGTCGGGTCATTCACGTCCACGGCGTAGAACTAACAACTTCAATAACTCATTGTTTGGAATCATGTCAGCAGCTCACTCTGGCGGGAAAGACATTCTTTTTCCTGATAACCAAACCGGAGGAGAGCACTCAGGAACCAACCCTGCTAGGGTGATAATCAGCTGTCCAGAGGTTGGCGAAGTTGGTGGGAAGTTGGTGCTGCTTCCGGGAAGCTACAACGAGCTGCTCGAGATTGGTTCGAAGAAATATGGGATTGTGGGTGCAAAGGTATTAACCAAAGATGGAGCTGCCATTGAAGATATAGAGGTCATTAGAGACGGTGATCATCTTGTTTTTGTCAGCGATGGAAAAACCATATAG | 2622 | 44.39 | MEGLRNRGVFRVSVCGQQELEQLSRDGSQYSLTTGVLPSLGARSNRRVKLRWFIISPYDRRYRIWETFLVVLVVYTAWVSPFEFGFLKKPQSPLSVTDNVVNGFFAVDIVLTFFVAYLHKATYLLVDDPKKIALKYARSWLIFDVISTIPSELAQKISPPPLRSYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAACFYYLIAARNSDPTKTWIGASIDDFLNQSLWVRYVTSIYWSITTLTTVGYGDLHPVNSKEMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTGRTRKFRDTIQAASSFAHRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQLVGEARTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLNIVQSNVGDGTIIMNNLLQHLRDLKDKDPIMEGVLLETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGLDPNESDNNGRTSLHIAASNGNENCVLLLLDYGADPNSRDSDGSVPLWEAILGGHEPVIQLLMDNGANLRSGDVGQFVCTAAEQNNLQLLKEIVRYGGDVRSAKINGTTALHVAVCEDNIEIVKFLLQQGADIDKADVHGWTPRDLADQQGHEEIKNLFQTTKESKTQSVIAIPEKQTGIRFLGRFTSEPTIRPVPQEGNDGSLSGHSRPRRRTNNFNNSLFGIMSAAHSGGKDILFPDNQTGGEHSGTNPARVIISCPEVGEVGGKLVLLPGSYNELLEIGSKKYGIVGAKVLTKDGAAIEDIEVIRDGDHLVFVSDGKTI | 873 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2414856 | 2419057 | - | Carg12139-RA | Car11g00432 | 156385 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat region circular profile. | 593 | 624 | - | - | |
| Car11g00432 | 873 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 380 | 482 | IPR000595 | - | |
| Car11g00432 | 873 | Pfam | Cyclic nucleotide-binding domain | 400 | 485 | IPR000595 | - | |
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat region circular profile. | 560 | 591 | - | - | |
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat region circular profile. | 657 | 688 | - | - | |
| Car11g00432 | 873 | MobiDBLite | consensus disorder prediction | 752 | 766 | - | - | |
| Car11g00432 | 873 | MobiDBLite | consensus disorder prediction | 741 | 766 | - | - | |
| Car11g00432 | 873 | Pfam | KHA, dimerisation domain of potassium ion channel | 804 | 866 | IPR021789 | - | |
| Car11g00432 | 873 | Pfam | Ankyrin repeats (3 copies) | 632 | 706 | IPR002110 | GO:0005515 | |
| Car11g00432 | 873 | Pfam | Ankyrin repeats (3 copies) | 532 | 621 | IPR002110 | GO:0005515 | |
| Car11g00432 | 873 | Pfam | Ion transport protein | 63 | 303 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat profile. | 593 | 625 | IPR002110 | GO:0005515 | |
| Car11g00432 | 873 | ProSiteProfiles | KHA domain profile. | 804 | 873 | IPR021789 | - | |
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat profile. | 657 | 689 | IPR002110 | GO:0005515 | |
| Car11g00432 | 873 | ProSiteProfiles | Ankyrin repeat profile. | 560 | 592 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g02227 | Car-Chr4:18066473 | Car11g00432 | Car-Chr11:2414856 | 3.72E-123 | dispersed | |
| Car09g00432 | Car-Chr9:2401581 | Car11g00432 | Car-Chr11:2414856 | 1.07E-07 | dispersed | |
| Car11g00432 | Car-Chr11:2414856 | Car13g00439 | Car-Chr13:6831686 | 5.50E-07 | dispersed | |
| Car15g00679 | Car-Chr15:3778794 | Car11g00432 | Car-Chr11:2414856 | 5.69E-111 | dispersed | |
| Car14g00509 | Car-Chr14:2799335 | Car11g00432 | Car-Chr11:2414856 | 2.55E-14 | transposed | |
| Car10g00536 | Car-Chr10:2688737 | Car11g00432 | Car-Chr11:2414856 | 0 | wgd | |
| Car11g00432 | Car-Chr11:2414856 | Car09g00415 | Car-Chr9:2299197 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00432 | K21867 | - | csv:101220784 | 1597.79 |