Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00469 ATGGGTTCGTTGAGAAGTGAACAACATGTGAACTTTGCTGCTCCAAGACCATTCGTGAAGAGGCTGAAATCAGATCTGAAAGAGACGTTTTATCCCGATGATCCCTTCAGGCAGTTTCGTGATGATAGGCGAACGCACCAACTCAAAAAGGCCGTCCAGTATTTCATCCCCATATTGGAATGGCTTCCTAAATACAATTTTAATATGTTTAAGTATGATTTGCTCGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCTAAGCTTGGCAGCCTCCCTCCCATCATCGGCCTTTATTCGAGCTTCGTTCCACCGCTTGTGTATGCGGTGTTTGGAAGCTCGAAGCATCTGGCGGTGGGTACGGTGGCGGCATGTTCGTTGCTAATAGCGGAAATCATCGGAGAAGTGGCGTCGCCGGAAGAAGACCCCACATTGTATCTACACCTGGTTTTAACAGCCACCTTAATCACCGGCCTCATGCAGACGGCCTTAGGGGTTCTACGATTGGGAATCTTGGTTGATTTCTTATCGCATTCAACGATCATAGGGTTTATGGGAGGAACAGCGGTGATCATTTGCCTGCAACAGCTGAAAGGCATATTCGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCGGTACTCCATGCCGTTTTCTCCCTTAGAAATGAGTGGAAATGGCAAAGTGCTGTCACGGGCGTCGTCTTCCTTGTCTTCCTCCAGCTTACTAGGTACCTGAGAGATAGAAACCCGAAGCTGTTTTGGGTATCAGCGATGGCTCCGATGGTGACAGTGATAGTCGGGTGTTTGGTTGCATATCTCGTCCATGGAAGTCAGCATGGAATCTTAACTGTGGGTCGCTTGAACAAAGGAATAAACCCTCCTTCTATTCACTCCTTGAACTTTGACCCAAAATATCTACCAGCTGTGGTACAAGCTGGTGCCATCACTGGCCTTGTGGCTTTGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCAATAATGAAAAACGAACAAGTCGACGGCAACAAAGAGATGGTAGCCTTTGGTTTGATGAACATTGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACGTAGTAATGGCGGTCTTCATGGCTCTCACGCTCCTCTTTCTAGCTCCTCTCTTCAGCTACACTCCTCTTGTAGCCCTTTCCGCCATTATTATGTCTGCCATGTTTGGTTTGATCAAATACGAAGAAATATATCATCTTTTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCTGCTTTCTTGGGCGTTGCTCTATTGAGCATGGATGTTGGCTTAATGCTTTCGGTGGGTCTTGCTTTGCTGAGAGCTCTTCTTTACATGGCTAGACCAGCAACTTGCAAGCTTGGGAAAATACCAGACACTGATTTGTATAGAGACGTGGAGCAGTATCCTAATGCAATGAGAGTCCCTGGAGTCATTGTTCTTCAACTTGGTTCCCCTATTTATTATGCCAACTCCAACTACATAAGAGAAAGGATTTTGAGATGGGTTCGTGATGAGCATGCCAAGTTCGATTCCGTAGATGGATCCGTCCAGCATGTACTGCTGGAGTTGAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACACTAATCGAAATTCGCAGATTGTTGCAAGCAAACGGAGTTAAGATGGGAATTGTAAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCAGAATTCACAAACACGATCGGGAAAGAAAACATCTATTTGTCAGTAGACGATGGAGTGGAAAAGTGCAGAGATTTGGCGTACAACCCACAGAAAACAAATCCAAGTGATGATAACGTGGAATTGAGCGCAGTGGAGCTGCGGATGGCATCACATGCACAACGCGATCATAATGTAAAATCTTGCTTTTTCTTTGAGGTTCTTCTTCTTCCAAATGTATGA 2022 45.6 MGSLRSEQHVNFAAPRPFVKRLKSDLKETFYPDDPFRQFRDDRRTHQLKKAVQYFIPILEWLPKYNFNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIAEIIGEVASPEEDPTLYLHLVLTATLITGLMQTALGVLRLGILVDFLSHSTIIGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRNEWKWQSAVTGVVFLVFLQLTRYLRDRNPKLFWVSAMAPMVTVIVGCLVAYLVHGSQHGILTVGRLNKGINPPSIHSLNFDPKYLPAVVQAGAITGLVALAEGIAIGRSFAIMKNEQVDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAVFMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEIYHLFKVDKFDFCICMAAFLGVALLSMDVGLMLSVGLALLRALLYMARPATCKLGKIPDTDLYRDVEQYPNAMRVPGVIVLQLGSPIYYANSNYIRERILRWVRDEHAKFDSVDGSVQHVLLELSGVTSIDMTGIETLIEIRRLLQANGVKMGIVNPRIVVMEKMIASEFTNTIGKENIYLSVDDGVEKCRDLAYNPQKTNPSDDNVELSAVELRMASHAQRDHNVKSCFFFEVLLLPNV 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2573890 2577227 + Carg12177-RA Car11g00469 156422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00469 673 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Car11g00469 673 ProSiteProfiles STAS domain profile. 501 623 IPR002645 -
Car11g00469 673 Pfam Sulfate permease family 70 451 IPR011547 GO:0016021
Car11g00469 673 Pfam STAS domain 502 618 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00469 Car-Chr11:2573890 Car14g01569 Car-Chr14:12815470 0 dispersed
Car10g00559 Car-Chr10:2824542 Car11g00469 Car-Chr11:2573890 0 wgd
Car11g00469 Car-Chr11:2573890 Car17g00760 Car-Chr17:6724810 0 wgd
Car11g00469 Car-Chr11:2573890 Car08g00573 Car-Chr8:3785602 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00469 K17471 - csv:116402148 1041.57