Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00470 ATGAATTTCAACTCCATTTTAAACCTCTCACTCCTCCTCCTTCTCCTCCGCCTCGCCGCCGCCACCGTCGGCCATGGCTCCCTCTCTGACGCCGAAGCTCTCTATATCCGGCAGCGTCAGCTTCTGTACTATCGAGATGAGTTCGGCGACCGTGGCGAGGAAGTTACCGTCGACCCATCTCTCGTTTTCGAAAACGAAAGGATCAGAAACGCCTACATTGCACTTCAAGCTTGGAAACTCGCCATTTTGTCCGACCCACTGAATCAAACAGCTAATTGGGTCGGATCTGATGTCTGCACCTACACCGGCGTTTACTGTGCTCCCGCATTGGACAACCCCAACATTCGTACTGTCGCCGGCATCGATCTCAATAACGGCGACATTGCCGGATACCTCCCCGAGGAGCTCGGTTTGCTTGTGGATCTAGCATTGTTCCACATCAACTCCAACAGATTCTGCGGCACTGTTCCTCACAAATTCGACCGTCTCAAGTTGCTTTATGAGTTGGATCTCAGTAATAATCGGTTCGCCGGGAGGTTTCCCGATGTGGTTCTCAGGCTTCCGATTCTCAAGTTTTTGGATCTGAGGTTTAACGAATTTGAAGGCAGTGTACCCAGAGAGCTGTTTGATAAGGATTTAGACGCCATTTTTATTAACCATAATCGGTTTAGATTCGAACTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTTGTGGCCAACAATAACTTCCATGGGTGTTTGCCTAAGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATCAGTTGGTGGGGCCATTGCCGGAGACCTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTTTCTGGGAAGATTCCGGGGAGTATTTGTGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCCGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGGCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCGTCTGTTACGCCTTCTTCTCCGTTTTCCCCTCCGGCTGTTTCGCCCTCTTCGCCTCCATCACCGGTGGCGCCGTCGTCACCTCCGTCTTTCCCGTCACCAGTGGCGCCATCATCACCTCCGTCGCCGTCTCAGTCTCCGAGTACACCGACGGAACCGCCATTGTCGCCCCATTTTCCTCCACTATCGCCACCGCCGTCGCCTTCATCTCCGACTACACCTACAACTCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCGCATCAAGGTCCTTCTCCGCCGTCACTACCCTCACCTTCCTCGCCGCCTCTAGGTCATACTCCGCCATCTGAGCCCACACAACCATCGCCACCTCACAGTCATACCCCGCCTACTCCACCTTCACCAACCAAGCCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAGCCCATACTCCGCAATCTCCACCTTCACCGACCGAGCCCTCTCCTTCCTCGCCGCCATATGGCCACATTCCCCCGGCTGAGCCTTCTCCACCTGGAATATCAGCACCGCCATTCCCAGTTCACACTCCGCCTCCACCACATTTCCCTGATTTTCCTTCGCCGCCAAATACCCAACCTCCAGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTCTCACTTCACCTCCCCCCCGCCGCCGCCACCTGTTTATTCCCCACCCCCTATTCATACATCGCCGTCCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACACCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCACCGCTATCTCCCTCACCCCCACCTCCAGTGATTTACGAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTCTATTAA 2361 54.26 MNFNSILNLSLLLLLLRLAAATVGHGSLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDPSLVFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCAPALDNPNIRTVAGIDLNNGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGRFPDVVLRLPILKFLDLRFNEFEGSVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVVANNNFHGCLPKSLGNMTRLNEIIMMNNGLNSCLPPVIGALKNLTVFDVSSNQLVGPLPETFGGLVSLEQLNVANNFLSGKIPGSICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPVDCNAFKCGGSSSVTPSSPFSPPAVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPSTPTEPPLSPHFPPLSPPPSPSSPTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAPSPSSPHQGPSPPSLPSPSSPPLGHTPPSEPTQPSPPHSHTPPTPPSPTKPSPSLPPQGHTPPGPSPSEPSPSSPPQAHTPQSPPSPTEPSPSSPPYGHIPPAEPSPPGISAPPFPVHTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDSHFTSPPPPPPVYSPPPIHTSPSPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPPGQYQSPPSPSPPVSVYPPLSPSPPPPVIYESPPPPPTPVYGGPLPPIYGVPYASPPPPPFY 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2579101 2581461 + Carg12178-RA Car11g00470 156423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00470 786 MobiDBLite consensus disorder prediction 395 773 - -
Car11g00470 786 Pfam Leucine rich repeat N-terminal domain 74 106 IPR013210 -
Car11g00470 786 Pfam Leucine rich repeat 283 340 IPR001611 GO:0005515
Car11g00470 786 MobiDBLite consensus disorder prediction 401 773 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01248 Car-Chr5:11663486 Car11g00470 Car-Chr11:2579101 0 dispersed
Car11g00470 Car-Chr11:2579101 Car14g01568 Car-Chr14:12812508 1.99E-140 dispersed
Car10g00558 Car-Chr10:2821826 Car11g00470 Car-Chr11:2579101 0 wgd
Car11g00470 Car-Chr11:2579101 Car12g01214 Car-Chr12:11564190 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00470 - - cmax:111499732 757.288