Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00491 ATGCAATGCTCAGGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAACATACTTTTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTGTCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGCACTTTCGGATATCTTGCTCCTGAATACGCTTCAAGTGGGAAACTAACTGAGAAATCAGATGTGTTCTCCTATGGAGTAATGCTTCTGGAGTTGATTACTGGACGCAGACCTGTTGATCCAACTCAATCATTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCAACAGAAAATGGAAACTACGACGGTTTGGTAGATCCAAAGCTGCGAGATAACCACGACCACAACGAGATGGCGCGCATGGTTGCTTGCGCTGCGGCTTGTGTGCGTCATTCGGCGAGGCGTCGACCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGAGAAGCCTCGCTTTCTGATCTGAACGAAGGAATCCGACCTGGACATAGCACTGTGTACAGTTCTTATGGAAGCTCCGACTACGACACGGCTCAGTACAACGAGGATCTGAAGAAGTTCAGGAAGATGGCGTTGGCGAGCCAGGAGTATGGCAGCGAGTATAGCGAGCCGACGAGTGAGTATGGGCTGTACCCATCTGGGTCGAGTGGCGATGGGCAAACAACGAGGGAAATGGAGACGAGAACGATGAAGAAAGAAAGTGGAGGCTTGATTTAG 765 48.63 MQCSGNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDPTQSFMDDGLLDWARPLLLRATENGNYDGLVDPKLRDNHDHNEMARMVACAAACVRHSARRRPRMSQVVHALEGEASLSDLNEGIRPGHSTVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGQTTREMETRTMKKESGGLI 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2668055 2669272 + Carg12199-RA Car11g00491 156444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00491 254 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00491 254 MobiDBLite consensus disorder prediction 217 254 - -
Car11g00491 254 MobiDBLite consensus disorder prediction 217 239 - -
Car11g00491 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Car11g00491 254 Pfam Protein kinase domain 8 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00491 Car12g01220 CCT
Car10g00573 Car11g00491 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00491 Car-Chr11:2668055 Car12g01220 Car-Chr12:11628396 4.08E-105 dispersed
Car10g00573 Car-Chr10:2897136 Car11g00491 Car-Chr11:2668055 1.06E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89171 PF00069 Pkinase 7.00E-23 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00491 - - csv:101222748 456.832