Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00513 ATGGGTTGCGTTCATTCGAGGGTTTGTTTTGGCGAGGCTACAACTCCAAGATCTTCAAGAATTGCCGACACCCAAAATGCCAATACCGCCGTTGAAATCGACGCGATCTCTACTTCATCTTCTGATAGCCAAGAAGATGAAATCCGCAACCAACTGAATTCAAACAACAGAGATTCAGAAGTTGGAATAACGAGGCTGTCGAGAATTTCAGCGCAGTTCCTGCCTGCTGATGGGTCTCGCACCGTCAAAGTCCCTTCTGGAAACTTCGAATTGCGATATTCGTTTCTTTCGCAAAGAGGGTACTATCCCGATGCTCTCGATAAGGCGAATCAAGATAGTTTTTGCATCCACACCCCATTTGGGAACAACCCAGATGACCATTTCTTTGGAGTTTTCGACGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTAAAACGAAAGCTCTGTGAAAATTTACTTAGAAATAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCACAATTACACGCAGATATGTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTACGACTATATATGTCTCTAATTCAGGTGATTCGAGAGCGGTTTTAGCCGAGCGGAGAGGAAAGGAAATTGTGGCTGTTGACCTCTCCATCGATCAAACCCCGTTCCGGACCGATGAACTCGAACGTGTTAAGCTTTATGGTGCCAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAACCCTGATGTTCGGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTATGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTAGTTGCTACACCGGAAATTGTTGTTCTAGAGCTGACACCGGATAATCCTTTCTTTGTTGTTGCTAGTGATGGGGTTTTCGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTGCTAAACATAAAGATCCTCGTGATGCTTGTGCTGCGATTGTGGCCGAGTCTTACAGACTTTGGCTTCAATATGAGACTCGAACTGATGATATCACTGTTATCGTGGTGCACGTTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCAGTGGAGGTGGTTTTGTTCGATCCACTGTTCCTCAAGTTTTGGAGGTGACAGGATCGGAATCTCCCTCTACCTTTGGCTGGAATCGAAACAACCGTGCAAGGCAAGATTTGTCACGGGCGCGTCTCAGGGCTATCGAAAGTTCCCTAGAGAATGGGCAGGTCTGGGCGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTACACGATCATTTCCTCTTCAGAAAATTAACCGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTCGAGGTCATACCGGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTATGTAGTTGGAAGCGGAGAGTTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTATACAGCTGAGAAGCTATCTTCCTTTGGCGAACTGGCTTTGATGTGGGTTCTCCCGTATAACAAGCCACTTCAAGCCTCCGTACGTGCTGTGACTAGTGGAACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCGAACTTGTCGTCCCTGAAATTGCTTCGATCTGTGGACCTTCTGTCGAGGTTAACGATCTTGCAATTGAGTCACATTGCAGATCGCCTTTCTGAAGTTACCTTCTCAGATGGGCAGTTGATAGTTGATGGGAACGAAGGTTTACGTGCACTTCACATTATTCATAAGGGCCAAGTGAGGATTACTTTTGATGCAGAGTTAATGAGCAATTCAAATATTTACGAGGACGAAGTTGCACAGAATGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGGGAATGGGCACTTCTTGGTGAGCATATTGGCTTCTTACACGCAGTTGCTGTGGGAGATGTCGTATGCGCTATTTTAACGAAGGAAAAGTTTGAATCAGTTGTTGGTCCTTTACCAAAGCTCTCTCAAGACGACCAAAAGGAACATTCTTCAGACTCCCTCCATCACTCTGCTAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTTGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACAGAATACAGTGAGATCGGGCTAGTTCGGTTAAAGAACACAGCAGAAAGTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGAACAAATGTTGAAGGAGAAAAATCTTATGAAAACCGTCAGTTCTTCAGCTTGTGTGCCGCAACTCCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAAAACATGCCTTGCTTGTCCTTTCTCTTCGATACTCCACGTTCCACTCGACGAGTCTTCTGCTCGTTTTTACGCAGCCTCTCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCCGATGTTCTAATGCTGGATCAAAATGGACGGATACAGTTAGTCGACTTCCGATTCGGGAAAAGAACGTTGGGTGAGAGAACGTATACTATGTCGGGGAGGGAAGAGTTTTTAGCACCTGAGATAGTTCAGGGCAATGGCCATGGTTTTGCTGCTGACTGGTGGGCGTTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAACGCCATTTGGATCGTGTCGTCAAAGCGAGCTCGATATTTCTTGTCTTCCCGAGATTATCAGTCCTGAAGCCACCGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAACGACTTGGCAACGAGAACGAATACTCGGTTAGAAGTCATCCCTGGTTTGATGGTGTCGATTGGAAGGGGATCCGTGACAGTACCTTTCCCGTTCCTGACTCGATCACTTCTCGTGTGGCTCAATATTTGGCGAGCTACCCTGAAGATTCCTGTGGTTCTTTAGTCGAACCACCTGAAGATCCCGACGAGTCGGATGCCCCCAAGTGGATGAGCGAGTGGTAG 3201 45.52 MGCVHSRVCFGEATTPRSSRIADTQNANTAVEIDAISTSSSDSQEDEIRNQLNSNNRDSEVGITRLSRISAQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNNPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADMLDDSMSGTTAITVLVRGTTIYVSNSGDSRAVLAERRGKEIVAVDLSIDQTPFRTDELERVKLYGARVLTLDQIEGLKNPDVRCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDNPFFVVASDGVFEFLSSQTVVDMVAKHKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHVNGLTNTVTSESTRSSGGGFVRSTVPQVLEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWAPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMWVLPYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSRLTILQLSHIADRLSEVTFSDGQLIVDGNEGLRALHIIHKGQVRITFDAELMSNSNIYEDEVAQNGKEISVIKKEGSYFGEWALLGEHIGFLHAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLKNTAESMLSLKRFTRQKVKRLGLEEQMLKEKNLMKTVSSSACVPQLLCTCLDQSHAGILLKTCLACPFSSILHVPLDESSARFYAASLVIALEDLHKLGVLYRGISPDVLMLDQNGRIQLVDFRFGKRTLGERTYTMSGREEFLAPEIVQGNGHGFAADWWALGVLIYFMLKGETPFGSCRQSELDISCLPEIISPEATDLIVKLLEVDEKKRLGNENEYSVRSHPWFDGVDWKGIRDSTFPVPDSITSRVAQYLASYPEDSCGSLVEPPEDPDESDAPKWMSEW 1066
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2776551 2781485 + Carg12221-RA Car11g00513 156466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00513 1066 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Car11g00513 1066 MobiDBLite consensus disorder prediction 1042 1066 - -
Car11g00513 1066 ProSiteProfiles Protein kinase domain profile. 762 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00513 1066 ProSiteProfiles PPM-type phosphatase domain profile. 92 382 IPR001932 -
Car11g00513 1066 Pfam Protein phosphatase 2C 115 361 IPR001932 -
Car11g00513 1066 ProSiteProfiles cAMP/cGMP binding motif profile. 607 740 IPR000595 -
Car11g00513 1066 Pfam Cyclic nucleotide-binding domain 497 589 IPR000595 -
Car11g00513 1066 Pfam Cyclic nucleotide-binding domain 626 723 IPR000595 -
Car11g00513 1066 Pfam Protein kinase domain 784 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00513 1066 ProSiteProfiles cAMP/cGMP binding motif profile. 477 589 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00592 Car11g00513 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00513 Car-Chr11:2776551 Car17g00262 Car-Chr17:1625720 2.60E-139 dispersed
Car10g00592 Car-Chr10:2991853 Car11g00513 Car-Chr11:2776551 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89172 PF00481 PP2C 3.20E-35 CL0238 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00513 - - csv:101217861 1848.56