Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00513 | ATGGGTTGCGTTCATTCGAGGGTTTGTTTTGGCGAGGCTACAACTCCAAGATCTTCAAGAATTGCCGACACCCAAAATGCCAATACCGCCGTTGAAATCGACGCGATCTCTACTTCATCTTCTGATAGCCAAGAAGATGAAATCCGCAACCAACTGAATTCAAACAACAGAGATTCAGAAGTTGGAATAACGAGGCTGTCGAGAATTTCAGCGCAGTTCCTGCCTGCTGATGGGTCTCGCACCGTCAAAGTCCCTTCTGGAAACTTCGAATTGCGATATTCGTTTCTTTCGCAAAGAGGGTACTATCCCGATGCTCTCGATAAGGCGAATCAAGATAGTTTTTGCATCCACACCCCATTTGGGAACAACCCAGATGACCATTTCTTTGGAGTTTTCGACGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTAAAACGAAAGCTCTGTGAAAATTTACTTAGAAATAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCACAATTACACGCAGATATGTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTACGACTATATATGTCTCTAATTCAGGTGATTCGAGAGCGGTTTTAGCCGAGCGGAGAGGAAAGGAAATTGTGGCTGTTGACCTCTCCATCGATCAAACCCCGTTCCGGACCGATGAACTCGAACGTGTTAAGCTTTATGGTGCCAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAACCCTGATGTTCGGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTATGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTAGTTGCTACACCGGAAATTGTTGTTCTAGAGCTGACACCGGATAATCCTTTCTTTGTTGTTGCTAGTGATGGGGTTTTCGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTGCTAAACATAAAGATCCTCGTGATGCTTGTGCTGCGATTGTGGCCGAGTCTTACAGACTTTGGCTTCAATATGAGACTCGAACTGATGATATCACTGTTATCGTGGTGCACGTTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCAGTGGAGGTGGTTTTGTTCGATCCACTGTTCCTCAAGTTTTGGAGGTGACAGGATCGGAATCTCCCTCTACCTTTGGCTGGAATCGAAACAACCGTGCAAGGCAAGATTTGTCACGGGCGCGTCTCAGGGCTATCGAAAGTTCCCTAGAGAATGGGCAGGTCTGGGCGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTACACGATCATTTCCTCTTCAGAAAATTAACCGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTCGAGGTCATACCGGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTATGTAGTTGGAAGCGGAGAGTTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTATACAGCTGAGAAGCTATCTTCCTTTGGCGAACTGGCTTTGATGTGGGTTCTCCCGTATAACAAGCCACTTCAAGCCTCCGTACGTGCTGTGACTAGTGGAACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCGAACTTGTCGTCCCTGAAATTGCTTCGATCTGTGGACCTTCTGTCGAGGTTAACGATCTTGCAATTGAGTCACATTGCAGATCGCCTTTCTGAAGTTACCTTCTCAGATGGGCAGTTGATAGTTGATGGGAACGAAGGTTTACGTGCACTTCACATTATTCATAAGGGCCAAGTGAGGATTACTTTTGATGCAGAGTTAATGAGCAATTCAAATATTTACGAGGACGAAGTTGCACAGAATGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGGGAATGGGCACTTCTTGGTGAGCATATTGGCTTCTTACACGCAGTTGCTGTGGGAGATGTCGTATGCGCTATTTTAACGAAGGAAAAGTTTGAATCAGTTGTTGGTCCTTTACCAAAGCTCTCTCAAGACGACCAAAAGGAACATTCTTCAGACTCCCTCCATCACTCTGCTAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTTGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACAGAATACAGTGAGATCGGGCTAGTTCGGTTAAAGAACACAGCAGAAAGTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGAACAAATGTTGAAGGAGAAAAATCTTATGAAAACCGTCAGTTCTTCAGCTTGTGTGCCGCAACTCCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAAAACATGCCTTGCTTGTCCTTTCTCTTCGATACTCCACGTTCCACTCGACGAGTCTTCTGCTCGTTTTTACGCAGCCTCTCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCCGATGTTCTAATGCTGGATCAAAATGGACGGATACAGTTAGTCGACTTCCGATTCGGGAAAAGAACGTTGGGTGAGAGAACGTATACTATGTCGGGGAGGGAAGAGTTTTTAGCACCTGAGATAGTTCAGGGCAATGGCCATGGTTTTGCTGCTGACTGGTGGGCGTTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAACGCCATTTGGATCGTGTCGTCAAAGCGAGCTCGATATTTCTTGTCTTCCCGAGATTATCAGTCCTGAAGCCACCGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAACGACTTGGCAACGAGAACGAATACTCGGTTAGAAGTCATCCCTGGTTTGATGGTGTCGATTGGAAGGGGATCCGTGACAGTACCTTTCCCGTTCCTGACTCGATCACTTCTCGTGTGGCTCAATATTTGGCGAGCTACCCTGAAGATTCCTGTGGTTCTTTAGTCGAACCACCTGAAGATCCCGACGAGTCGGATGCCCCCAAGTGGATGAGCGAGTGGTAG | 3201 | 45.52 | MGCVHSRVCFGEATTPRSSRIADTQNANTAVEIDAISTSSSDSQEDEIRNQLNSNNRDSEVGITRLSRISAQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNNPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADMLDDSMSGTTAITVLVRGTTIYVSNSGDSRAVLAERRGKEIVAVDLSIDQTPFRTDELERVKLYGARVLTLDQIEGLKNPDVRCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDNPFFVVASDGVFEFLSSQTVVDMVAKHKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHVNGLTNTVTSESTRSSGGGFVRSTVPQVLEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWAPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMWVLPYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSRLTILQLSHIADRLSEVTFSDGQLIVDGNEGLRALHIIHKGQVRITFDAELMSNSNIYEDEVAQNGKEISVIKKEGSYFGEWALLGEHIGFLHAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLKNTAESMLSLKRFTRQKVKRLGLEEQMLKEKNLMKTVSSSACVPQLLCTCLDQSHAGILLKTCLACPFSSILHVPLDESSARFYAASLVIALEDLHKLGVLYRGISPDVLMLDQNGRIQLVDFRFGKRTLGERTYTMSGREEFLAPEIVQGNGHGFAADWWALGVLIYFMLKGETPFGSCRQSELDISCLPEIISPEATDLIVKLLEVDEKKRLGNENEYSVRSHPWFDGVDWKGIRDSTFPVPDSITSRVAQYLASYPEDSCGSLVEPPEDPDESDAPKWMSEW | 1066 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2776551 | 2781485 | + | Carg12221-RA | Car11g00513 | 156466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00513 | 1066 | ProSitePatterns | PPM-type phosphatase domain signature. | 128 | 136 | IPR000222 | GO:0043169 | |
Car11g00513 | 1066 | MobiDBLite | consensus disorder prediction | 1042 | 1066 | - | - | |
Car11g00513 | 1066 | ProSiteProfiles | Protein kinase domain profile. | 762 | 1009 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g00513 | 1066 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 382 | IPR001932 | - | |
Car11g00513 | 1066 | Pfam | Protein phosphatase 2C | 115 | 361 | IPR001932 | - | |
Car11g00513 | 1066 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 607 | 740 | IPR000595 | - | |
Car11g00513 | 1066 | Pfam | Cyclic nucleotide-binding domain | 497 | 589 | IPR000595 | - | |
Car11g00513 | 1066 | Pfam | Cyclic nucleotide-binding domain | 626 | 723 | IPR000595 | - | |
Car11g00513 | 1066 | Pfam | Protein kinase domain | 784 | 1009 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g00513 | 1066 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 477 | 589 | IPR000595 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00592 | Car11g00513 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00513 | Car-Chr11:2776551 | Car17g00262 | Car-Chr17:1625720 | 2.60E-139 | dispersed | |
Car10g00592 | Car-Chr10:2991853 | Car11g00513 | Car-Chr11:2776551 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89172 | PF00481 | PP2C | 3.20E-35 | CL0238 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00513 | - | - | csv:101217861 | 1848.56 |