Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00532 ATGACGACGACGGCGTTTCTTTCTTCCCTTATCTTTTTTCTGGAAACCATTTCTTTCCTCCTCCTCCTCCTCCTCTGTTCCCACCATGTCAATTCCCAACTCTACCAACAAGAACACTCTGTTCTGCTCCGATTGAACCAGTTCTGGAAAAATCAAGCCCCAATCGCCCATTGGCGGTCTTCAAATGCTTCTCATTGTACATGGCCGGAGATTCGGTGCACTAACAACTCCGTCACTGCTCTGCTTTTCAATGGCTACAATTTGAACGGAACCTTCCCTCCTTTCCTATGCGATCTCAACAATCTCACCCAACTTGATCTTAACCTCAATTATATCGCCGATGGCTTTCCTACCACTCTGTACAGTTGTTCGAAGCTTAATTACATCAATCTTGCGCAGAATTACTTCGACGGTCCAATTCCCGATGATGTCCACCGCTTGTCTCGCCTCCAATATCTTAATCTCGGCGGCAACAGATTCTCCGGCGAAATTCCGGCATCCATTTCTCGGTTGGCAGAGCTTCGATCCCTTAATCTTTATGTGAACAAATTCAATGGGAATTTCCCATCTGAAATCGGTAACTTGTTGAATCTGGAAGAATTACTGTTGGCTTATAATTCACTTCTGCTACCGGCGGAATTGCCCCCCAGTTTCGCCCAATTGAAGAAATTGAAGTTTATATGGATGACAGAAACGAACCTAGTGGGTGAAATTCCTGATTGGATCGGGAATTTGACCGACCTCGAGACGTTGAATTTGTCGGAAAACAATTTGACAGGGAAAATTCCCAGCAGTTTGTTTATGCTGAAGAATCTCAGTTTCGTTTATCTGTTCAGGAACAATCTGTCCGGAGAAATCCCGACTCGGATTGATTCAAAAAAGATCGTAGAATACGACCTATCAGAAAATAATTTGACCGGGGAAATTCCGGCAGCTATCGGCGATCTTCAGCAATTGAAGGCTTTGCTTCTGTTTACAAATCGATTACATGGAGAAATCCCTGAAAGCATCGGACGTCTTCCAAAATTAGATGATGTCAGATTGTTCGATAACAGTTTAACCGGCACGTTGCCGCCGGATTTCGGCCGGAATTTGGTTCTCAGAAGTTTTCAGGTGGGCAACAATAAGCTTACTGGAAGGTTGCCGGAGCACTTGTGCTCCGGCGGTAAGCTCTTAGGAGTTACTGCATACGAGAATAATCTTAGTGGGGAACTGCCAGAGTCGCTTGGGAATTGCAGCAGCTTGATGATGATTGATGTTCATAAGAACAACTTTTCTGGGAAAATTCCGGTGGGTCTATGGATGTCTCTTAATTTGACATTTGTAATGATGAGCGACAATTCTTTCACCGGTGAACTTCCTGAGAGATACTCAACGAATCTTGGGAGTTTGGAAATCAGTAACAACAAATTTTCAGGGAAAATCCCATCTGGGTTATCTTCTTTATGGAATTTGACTGAGTTTCTAGCAAGCAATAATTTATTTACAGGACAAATTCCTGAAGAACTCACTGTTCTTTCAAGGTTGAACAAGCTCTGGCTCGATGGAAATCAACTCACCGGAGAGCTTCCACAGAATATCATTTCATGGAGATCATTGAACAATCTTAACCTCAGTCGAAATCGTCTCTCAGGTGTAATTCCAGATGAACTTGGTGGTTTACCAAGCCTTACTGATCTTGATCTCTCAGAGAATCAACTTTCCGGGATGATTCCGACTCAACTAGGAAATTTGGAACTGAATTTCCTCAACCTCTCCTCAAATTTGTTGTCTGGGATAATTCCCTTGGCACTTGAAAACCAAATCTATACCAGAAGCTTTTTGAACAATCCAAATCTTTGTTCGAACAAAGCAGTTCTAAATTTGAATAGCTGCAATTTGAGATCTCAGAATTCAAAAACGATTTCATCGCAGCATCTTGCTCTGATCGTGAGCTTGGGCGTTATACTGTTCATACTCTTTATACTTGCTGCTGTGTTCACAACCAAAATCTACTGGAAAACCGGAAACAGAGAAGATATTGAATGGAAATTGACCTCATTTCAAAGGCTGAATTTCTCGGAGGCAAAACTTTTATCTGGGTTATCGGAAAATAACGTGATCGGAAGTGGTGGATCAGGGAAAGTTTACCGGATTCCGGTGAATAATTTGGGCGATACAGTGGCCGTGAAGAAGATATGGAACAACAGAAAGTCAGACCACAAGCTGGAGAAAGAATTCATGGCGGAAGTGAAGGTTTTGAGTTCGATTCGCCATAACAACATAATCAAACTCCTCTGTTGCGTTTCCAGTGAAACTTCTCGGCTTCTCGTTTATGAGTACATGGAGAAGCAAAGCTTGGACAAATGGCTGCACAAGAGGAACTCGCCGCCGATAATTACAGGTCCGGAGCCTGATTGCGGTGTCCCCCTCGATTGGCCGACGAGATTTCAAATAGCGGTGGGGGCAGCACAAGGCCTCTGTTATATGCACCATGAATGCTCACCTCCAGTAATTCATAGAGACTTGAAATCAAGCAATATCTTACTAGATTCAGAACTCAATGCCAAAATAGCAGATTTTGGGTTAGCCAAGTTGCTGGTAAAACATGGAGAAGCGGCTTCAGTTTCCGCCGTGGCGGGCTCTTTTGGATACATAGCTCCAGAGTATGCTCAAACACCGAGAATTAATGAGAAGATCGACGTGTTTAGCTTTGGGGTAATTCTTTTAGAGTTGGCGACTGGAAAGGATGCCCTCAATGGCGATGAGGACTCGTCTCTGGCGGAGTGGGCTTGGGAGTGCATTCAACAAGGCAAGCGAATAGCCGATGTATTGGATGAAGATGTGAAGGAGCCGCATTATCTTGATGAGATGTGCAGTGTTTTTAAACTCGGAGTGATCTGCACTTCTAGTTTGCCAACTAACCGGCCAACCATGCACCAGGCTTTGGAAGTCTTGATCCGTAGTCGGACCTCGACACCCCGAAATCATGAAGAGAAGAAACTCGGATCGTGA 2994 43.95 MTTTAFLSSLIFFLETISFLLLLLLCSHHVNSQLYQQEHSVLLRLNQFWKNQAPIAHWRSSNASHCTWPEIRCTNNSVTALLFNGYNLNGTFPPFLCDLNNLTQLDLNLNYIADGFPTTLYSCSKLNYINLAQNYFDGPIPDDVHRLSRLQYLNLGGNRFSGEIPASISRLAELRSLNLYVNKFNGNFPSEIGNLLNLEELLLAYNSLLLPAELPPSFAQLKKLKFIWMTETNLVGEIPDWIGNLTDLETLNLSENNLTGKIPSSLFMLKNLSFVYLFRNNLSGEIPTRIDSKKIVEYDLSENNLTGEIPAAIGDLQQLKALLLFTNRLHGEIPESIGRLPKLDDVRLFDNSLTGTLPPDFGRNLVLRSFQVGNNKLTGRLPEHLCSGGKLLGVTAYENNLSGELPESLGNCSSLMMIDVHKNNFSGKIPVGLWMSLNLTFVMMSDNSFTGELPERYSTNLGSLEISNNKFSGKIPSGLSSLWNLTEFLASNNLFTGQIPEELTVLSRLNKLWLDGNQLTGELPQNIISWRSLNNLNLSRNRLSGVIPDELGGLPSLTDLDLSENQLSGMIPTQLGNLELNFLNLSSNLLSGIIPLALENQIYTRSFLNNPNLCSNKAVLNLNSCNLRSQNSKTISSQHLALIVSLGVILFILFILAAVFTTKIYWKTGNREDIEWKLTSFQRLNFSEAKLLSGLSENNVIGSGGSGKVYRIPVNNLGDTVAVKKIWNNRKSDHKLEKEFMAEVKVLSSIRHNNIIKLLCCVSSETSRLLVYEYMEKQSLDKWLHKRNSPPIITGPEPDCGVPLDWPTRFQIAVGAAQGLCYMHHECSPPVIHRDLKSSNILLDSELNAKIADFGLAKLLVKHGEAASVSAVAGSFGYIAPEYAQTPRINEKIDVFSFGVILLELATGKDALNGDEDSSLAEWAWECIQQGKRIADVLDEDVKEPHYLDEMCSVFKLGVICTSSLPTNRPTMHQALEVLIRSRTSTPRNHEEKKLGS 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2878304 2881374 + Carg12240-RA Car11g00532 156485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00532 997 PRINTS Leucine-rich repeat signature 533 546 - -
Car11g00532 997 PRINTS Leucine-rich repeat signature 554 567 - -
Car11g00532 997 Gene3D Transferase(Phosphotransferase) domain 1 775 995 - -
Car11g00532 997 SUPERFAMILY L domain-like 58 382 - -
Car11g00532 997 SMART LRR_typ_2 316 340 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 195 220 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 245 269 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 506 530 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 147 171 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 99 123 IPR003591 -
Car11g00532 997 SMART LRR_typ_2 554 578 IPR003591 -
Car11g00532 997 Gene3D Ribonuclease Inhibitor 187 294 IPR032675 -
Car11g00532 997 Gene3D Ribonuclease Inhibitor 35 186 IPR032675 -
Car11g00532 997 Gene3D Ribonuclease Inhibitor 295 457 IPR032675 -
Car11g00532 997 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 18 988 - -
Car11g00532 997 ProSiteProfiles Leucine-rich repeat profile. 247 269 IPR001611 GO:0005515
Car11g00532 997 SUPERFAMILY RNI-like 299 640 - -
Car11g00532 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Car11g00532 997 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Car11g00532 997 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Car11g00532 997 SUPERFAMILY Protein kinase-like (PK-like) 688 979 IPR011009 -
Car11g00532 997 Gene3D Phosphorylase Kinase; domain 1 677 774 - -
Car11g00532 997 ProSitePatterns Protein kinases ATP-binding region signature. 701 725 IPR017441 GO:0005524
Car11g00532 997 Pfam Protein kinase domain 697 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00532 997 ProSiteProfiles Protein kinase domain profile. 695 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00532 997 Gene3D Ribonuclease Inhibitor 458 649 IPR032675 -
Car11g00532 997 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 18 988 - -
Car11g00532 997 SMART serkin_6 695 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00604 Car11g00532 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00532 Car-Chr11:2878304 Car13g00509 Car-Chr13:7177936 0 dispersed
Car10g00604 Car-Chr10:3080700 Car11g00532 Car-Chr11:2878304 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89173 PF00069 Pkinase 3.10E-49 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00532 - - csv:101214935 1483.77