Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00535 ATGGGGAGAGCCACCAGATGGCTGAAGAACTTGTTTGGGATTAAGAAAGAAAAACAACCCACCATGGAAAATTCCACCTCCGCCTTCATGAAGGATAACAACCCCACTTCTAATTTCGTCGGAGACGCCCAACTCTGCAACAATCCGGCTACAATACCGCCCAATTTATCCGCCGCTGAGGCCGCTTGGCTCAAATCCTTCTACTCCGAAACAGAGAAGGAACAGAGCAAGCACGCTATAGCAGTCGCTGCAGCCACTGCTGCTGCTGCTGATGCTGCGGTTGCTGCAGCACAAGCTGCTGTGGCTGTCGTCCGGCTCACTAGCCATGGGCGAGGTACTATGTTCGGTGGCGGCCGAGAGAGATGGGCCTCTGTCAAGATTCAAACTTGCTTCAGAGGGTTTCTGGCGAGAAAAGCACTGAGAGCGCTTAAAGGACTGGTGAAATTACAGGCGCTTGTGAGAGGATATTTGATTCGTAAACAAGCAACGGCAACTCTTCATAGTATGCAAGCTTTAATCAGAGCTCAGGCCACCGTTCGATCTCAGAGAACTCGCAGATTTGAACTCCAAGCTCGAAAATCTACGGAGCGGTTTGACGACACAAGGAGTGAGCACACAGCTTCAGTACACAGCAGAAGGCTTTCATCTTCTTTTGACAACACACCATTTACAGCGCTTGAAGAAAGCCCCAAAATCGTTGAAATGGACACCGGCCGACCAAAATCCTGGTCACGCCGGACGAACACGTCGGCGTCGGAATTTGGCGACGACCCATTTCATCAAACGTTGTCGTCTCCACTCCCCTGTCGAACTCCGTCGCGTTTGCAGATTCCTGATTGCCGGCATGATTCCGACTGGGGTCTCACTGGCGACGAGTGCCGTTTGATCTCGACAGCGCAGAGCACTCCACGATTCGTCAGCTCCGGCAGATCCAATGGCCCTCCGACGCCAGCGAAGAGCATGTGTGCTGATAATTTCTTCAGAGGGTACTTGAATTTCCCAAATTACATGGCGAATACTCAATCGTTTATGGCGAAATTGAGGTCCCAGAGTGCTCCGAAACAGAGGCCGGAGCCGGGCTCAAAGAAGAGGCTTTCGTTGAATGAATTAATGGAATCGAGAAGCAGCCTTAGTGGGGTTCGAATGCAGAGGTCTTGTTCGCAGGTACAAGAAGCCATTAATTTCAAAAATGCTGTGATGAGCAAACTGGATAGACCATCGGAATTCAACAACTTGCAGAGAAGATCATGA 1251 50.68 MGRATRWLKNLFGIKKEKQPTMENSTSAFMKDNNPTSNFVGDAQLCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGFLARKALRALKGLVKLQALVRGYLIRKQATATLHSMQALIRAQATVRSQRTRRFELQARKSTERFDDTRSEHTASVHSRRLSSSFDNTPFTALEESPKIVEMDTGRPKSWSRRTNTSASEFGDDPFHQTLSSPLPCRTPSRLQIPDCRHDSDWGLTGDECRLISTAQSTPRFVSSGRSNGPPTPAKSMCADNFFRGYLNFPNYMANTQSFMAKLRSQSAPKQRPEPGSKKRLSLNELMESRSSLSGVRMQRSCSQVQEAINFKNAVMSKLDRPSEFNNLQRRS 416
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 2896851 2898325 + Carg12243-RA Car11g00535 156488
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g00535 416 Pfam Protein of unknown function (DUF4005) 305 381 IPR025064 -
Car11g00535 416 MobiDBLite consensus disorder prediction 235 267 - -
Car11g00535 416 MobiDBLite consensus disorder prediction 193 214 - -
Car11g00535 416 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Car11g00535 416 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515
Car11g00535 416 MobiDBLite consensus disorder prediction 193 209 - -
Car11g00535 416 MobiDBLite consensus disorder prediction 242 267 - -
Car11g00535 416 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Car11g00535 416 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car10g00607 Car11g00535 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01123 Car-Chr5:10760097 Car11g00535 Car-Chr11:2896851 5.37E-23 dispersed
Car11g00535 Car-Chr11:2896851 Car14g01570 Car-Chr14:12821341 5.41E-40 dispersed
Car01g00077 Car-Chr1:426983 Car11g00535 Car-Chr11:2896851 6.13E-70 wgd
Car10g00607 Car-Chr10:3093336 Car11g00535 Car-Chr11:2896851 0 wgd
Car11g00535 Car-Chr11:2896851 Car14g01140 Car-Chr14:10044241 3.82E-82 wgd
Car11g00535 Car-Chr11:2896851 Car17g00704 Car-Chr17:6456875 1.14E-114 wgd
Car11g00535 Car-Chr11:2896851 Car08g00629 Car-Chr8:4031350 2.49E-122 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00535 - - cmax:111495188 731.865