Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00536 ATGTCAAAACTTCAGCCCCCTTTCGCGTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCTCACTCAAACGCACTGCCACACTAAAGGGATCAGACCCAAGAAATCGCCAAGAACCATTCTTCCCAAGAATTCCACCAAAACCCAATTCTCAGAACAGCAATTTATGAAATGGGTCAAATTCGTCGGCAGCCTCAAACACTCTGTTTTCAGAACGGCGAAGAATAAGCTGTTTCCTTCTTACACACTCCACGTCGCTAAAAACCCCGCCGCCGGCGACTTTACGTCGATACAAGACGCCATCGATTCCCTACCCTTCATTAATTTGATTAGAGTTGTGATCAAGGTTCATGCAGGAGTATACAAAGAAAAAGTAATCATACCACCGTTCAAATCGTTCATAACAATCGAAGGAGCAGGGGCAGCCAAAACGATCGTTCAATGGGGGGACACAGCACAAACACCAGGCCCAAAGGGGCAGCCGTTGGGGACCTATAACTCCGCAACATTCGCAGTAAATTCCCCTTATTTCATAGCCAAAAACATCACATTCAAGAACACCACCCCTGTACCACCACCAGGGGCGATAGGAAAGCAGGCGGTGGCGTTCAGAATCTCAGGCGACACGGCGGCATTCTACGGATGCAGATTCTTAGGAGCTCAGGACACACTGTACGACCATCTGGGTCGGCATTATTACAAGGATTGTTACATCGAAGGGTCAGTGGACTTCATTTTTGGAAATGGGTTGTCTCTGTTTGAGGGGTGTCACGTGCACGCAATAGCGAGGTACACAGGGGCGTTGACAGCGCAGGGGAGAAGCAGCCTGCTGGAGGACACAGGGTTCTCATTCGTAAACTGTAAGGTCACGGGGTCTGGAGCGCTGTACTTGGGAAGGGCATGGGGGCCCTTCTCTAGGGTCGTCTTCGCTTACACTTACATGGACAATATCATCATTCCCAAAGGCTGGTACAATTGGGGCGATCCCAATCGCGAAATGACTGTGTTCTACGGGCAATACAAATGTACAGGAGAAGGAGGTAGGTTTGCAGGCAGAGTTTCATGGTCCAGAGAGCTCACTGACGAGGAAGCCAAGCCTTTTATTTCGCTTAGCTTCATCGATGGCTCTGAATGGATCAAAATTTAA 1152 48.61 MSKLQPPFAFSLLLLLLLLLLLLTQTHCHTKGIRPKKSPRTILPKNSTKTQFSEQQFMKWVKFVGSLKHSVFRTAKNKLFPSYTLHVAKNPAAGDFTSIQDAIDSLPFINLIRVVIKVHAGVYKEKVIIPPFKSFITIEGAGAAKTIVQWGDTAQTPGPKGQPLGTYNSATFAVNSPYFIAKNITFKNTTPVPPPGAIGKQAVAFRISGDTAAFYGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIARYTGALTAQGRSSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGEGGRFAGRVSWSRELTDEEAKPFISLSFIDGSEWIKI 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2899346 2901379 - Carg12244-RA Car11g00536 156489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00536 383 Pfam Pectinesterase 87 377 IPR000070 GO:0030599|GO:0042545
Car11g00536 383 ProSitePatterns Pectinesterase signature 2. 240 249 IPR033131 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00608 Car11g00536 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00908 Car-Chr9:5602260 Car11g00536 Car-Chr11:2899346 2.54E-43 dispersed
Car11g00536 Car-Chr11:2899346 Car15g01027 Car-Chr15:8018790 1.30E-106 dispersed
Car04g00715 Car-Chr4:4134068 Car11g00536 Car-Chr11:2899346 4.20E-174 transposed
Car10g00739 Car-Chr10:3889297 Car11g00536 Car-Chr11:2899346 2.66E-90 transposed
Car14g00221 Car-Chr14:1045963 Car11g00536 Car-Chr11:2899346 7.13E-102 transposed
Car10g00608 Car-Chr10:3096296 Car11g00536 Car-Chr11:2899346 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00536 K01051 - csv:101215894 699.893