Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00565 ATGGAGAAGAGTCATCTTGATGTGGCTGGGAAAGTGGTGGTGGTCGCCATTAAAGCCACCTCCAAGGAAGTTTCTAAGACTGCTCTGGTTTGGGCTTTGACTCATGTTGCTCAGCCTGGAGATCATATTAAGCTCCTTGTGGTTATTCCCTCTCATCACTCAAGTAAATGGTTGCGGGGGTTTTCCCGATTTACGAGCGACTGTGCGATTGGTCATCTTAGAACACCATCAGAGACCCTTTCAGATCAGAAGGATGACATTGTGCATTCATGTTCTCAAATGGTTCATCAGCTTCATGGTGCTTATGAACCACTGAAGATAAAAGTCAGGATCAAAGCTCTTTCGGGTTTGGCTCGGGGTATCGTGGCTACTGAAGCTAAGAAAGTTCAATCAAACTGGGTGATATTGGACAAGCATTTGAAAGATGAAAGGAAGAACTGTTTGGAAGAGCTGCAGTGTAATGTTGTTCTAATGAAGAAATCTCAGCCTAAGGTTCTTCGTTTGAATTTGATGGAATCCCCTAAAATCAATACTACTAGAGAAGCTTGGATATCATCACATGAATTAGATGTCTCTCAGAAGTGTCTGAAAAGCTATTTCGATGAATCGGCTGCATTTAGGGGGCCTGATATGACTCCTGTGAGTACTCCTGATGTCGAGTCACCTCTTACGGTAACTGATGTTGGGACATCGTCGATATCGAGCTCGGATGTGGGCAGTTCATCTTTGTTCTCTGGGTTTTGTGGCAGCTTGAGAAATGAATCCAGAACAGCAGCTGAAGGTGGGAGAAATTTATCTGGATCTGAATGTGATTCTGAAAACGAAAAGCAAACTCCATCCGTTTCGTATTTCCAGCGTTGTATGGTTGATATTGTAAGTTCGAGGCGTAAAATCCAGCAACACGTAATGGAAGAATCACAAAATGTTCATCATAGACCTCCAGCTTCAACACGTCAAGGTCTAGTCAAGAAAATGTCAACTCTTTCTCAAGATCCTAACACCGATGCGGTGAGTCGAAGTACTAATGTTAGCTCAAGCAGAAACATAAGGAACACGGTTTCGTTATCCAGAAAAGCACCTCTAGGCCCTCCTCCACTGTGTTCAATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGGAGAGCTTGAAGTTGCTACGAGCGGATTTGCACAAACGAATTTTTTGGCTGAGGGTGGATATGGGTCTGTGCACCGAGGCATCTTACCCGATGGACAAGTCGTTGCTGTCAAGCAATATAAACTGGCTAGTACCCAGGGGGATCAAGAATTTTGTTCAGAAGTCGAGGTCTTAAGCTGTGCTCAACATCGGAACGTCGTGATGCTCATTGGATTTTGCGTGGAGGGTGGAAGAAGGTTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGACGAAATCGGGATCCGTTGAAATGGTCTGCACGACAAAAGATCGCAGTCGGAGCTGCTCGAGGTTTGAGGTACCTTCACGAAGAATGTCGGGTGGGGTGTATTGTGCACCGTGATATCCGCCCAAACAATATCCTCCTTACTCATGATTTCGAACCACTAGTCGGAGATTTTGGGCTGGCAAGGTGGCAGCCTGATGGGGACCTAGCAGTGGAAACCAGAATCCTGGGGAGATTTGGCTACCTTGCTCCAGAGTATGCACAGAGTGGCCAAATCACGGAGAAAGCCGATACATACTCCTTCGGTGTAGTCTTGCTGGAACTCGTGACTGGACGTAAAGCGATCGATTTAAACCGTCCCAAGGGCCAGCAGTGCCTCACAGAATGGGCACGAAAGCTATTGCGAAAAAACGCAATCTCTGAACTAGTCGATCCATGCTTAATGAACTGTTATTCGGACGAGGAAGTTCACCGCATGCTGCGATGCGCTTCCTTGTGCATCAAACACGACCCGTACATAAGACCGCGTATGTCTCAGTCTCCGGCAATTGATTTTCGTCGAGGAATAGTCGATACTCCCTCCGTCGCTCTCGATTTCCCGCTGATGCAGTCACTTCTCAAAGCTCGCCGCTCATTTTGCTCACTCAATCATCTTCGTCGCTCATCAACTTTCATTTTGGAAGACGCAAAATCGGAAACTGCCATTGAAAGAAGCTCTACGTTCATCCATCCAACCGCTGTCGTACATCCGAATGCTGTAATTGGCGAGGATGGGTATATTGGTCCATTCTGTACTGTGGGAGCCTTTGCAAAGCTTGGAAATGGTTGTCAATTACATCCTGGAAGCCACATTTTTGGCTGTACAGAACTAGGGGATCGATGTGTCTTGATGACTGGCGCAATAGTTGGTGAGGACCTTCCTGGTCGTACGGTCATTGGGTGTAATAACAAAATAGGTCACCATGCAGTGGTTGGCATTAGATGCCAAGACATGAAATACAAGCCAGGGGATGAATGCTTCCTTGATATTGGAGATAACAATGACATAAGAGAACATTCATCAATCCACCGATCTTCGAAGTCAAGTGATGTGACGGCTATTGGTGACAACAATCTCATAATGGGATCCTGTCATATTGCTCATGATTGCAAGATCGGGAACAACAATATTTTTGCAAATAATACTCTTCTAGCCGGCCATGTTGTGGTGGAGGACTACGTTCACACAGCAGGCGCCACTGCAGTTCATCAATTCTGCCATGTTGGTTCTTTCTCATTTGTTGCTGCGGGTTCGATGGTTTCCCAAGATGTACCTAAATATATGATGGTGGCGGGAGAAAGACCAGAACTTCGTGGTTTGAATCTAGAGGGACTTCGGCGCAATGGATTCACGGGGGAAGAGATCAATGGCTTGAGATCTGCTTACAGGAAGGTATTCATGCCTACTGATACAAAGTTTAAAGGGTTGGAAGAACGTCTCGAAGAAGTGAAGTTGCACATGAATCTCCTGATGGGAACGCAAATCTACAGTGCTGTGGACAATTTCTTGGTCAGCTCCCTGGAAAATGGAAAGGAAAGGAATGGAATGGAACTCTTCGGCTTGACCAAGGTTGTAGGAAATCCAAAGCAATCTTTCAAAGGTAACAACCTCTGA 3099 45.69 MEKSHLDVAGKVVVVAIKATSKEVSKTALVWALTHVAQPGDHIKLLVVIPSHHSSKWLRGFSRFTSDCAIGHLRTPSETLSDQKDDIVHSCSQMVHQLHGAYEPLKIKVRIKALSGLARGIVATEAKKVQSNWVILDKHLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTTREAWISSHELDVSQKCLKSYFDESAAFRGPDMTPVSTPDVESPLTVTDVGTSSISSSDVGSSSLFSGFCGSLRNESRTAAEGGRNLSGSECDSENEKQTPSVSYFQRCMVDIVSSRRKIQQHVMEESQNVHHRPPASTRQGLVKKMSTLSQDPNTDAVSRSTNVSSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYGELEVATSGFAQTNFLAEGGYGSVHRGILPDGQVVAVKQYKLASTQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARKLLRKNAISELVDPCLMNCYSDEEVHRMLRCASLCIKHDPYIRPRMSQSPAIDFRRGIVDTPSVALDFPLMQSLLKARRSFCSLNHLRRSSTFILEDAKSETAIERSSTFIHPTAVVHPNAVIGEDGYIGPFCTVGAFAKLGNGCQLHPGSHIFGCTELGDRCVLMTGAIVGEDLPGRTVIGCNNKIGHHAVVGIRCQDMKYKPGDECFLDIGDNNDIREHSSIHRSSKSSDVTAIGDNNLIMGSCHIAHDCKIGNNNIFANNTLLAGHVVVEDYVHTAGATAVHQFCHVGSFSFVAAGSMVSQDVPKYMMVAGERPELRGLNLEGLRRNGFTGEEINGLRSAYRKVFMPTDTKFKGLEERLEEVKLHMNLLMGTQIYSAVDNFLVSSLENGKERNGMELFGLTKVVGNPKQSFKGNNL 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3033635 3043447 + Carg12274-RA Car11g00565 156518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00565 1032 ProSitePatterns Tyrosine protein kinases specific active-site signature. 517 529 IPR008266 GO:0004672|GO:0006468
Car11g00565 1032 Pfam Protein tyrosine and serine/threonine kinase 400 640 IPR001245 GO:0004672|GO:0006468
Car11g00565 1032 MobiDBLite consensus disorder prediction 310 355 - -
Car11g00565 1032 ProSiteProfiles Protein kinase domain profile. 396 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00565 1032 Pfam Bacterial transferase hexapeptide (six repeats) 849 880 IPR001451 -
Car11g00565 1032 Pfam Udp N-acetylglucosamine O-acyltransferase; Domain 2 918 979 IPR029098 -
Car11g00565 1032 MobiDBLite consensus disorder prediction 301 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02326 Car-Chr4:18745941 Car11g00565 Car-Chr11:3033635 2.62E-24 dispersed
Car09g00161 Car-Chr9:758697 Car11g00565 Car-Chr11:3033635 3.67E-38 dispersed
Car11g00565 Car-Chr11:3033635 Car15g00207 Car-Chr15:1142382 7.12E-91 dispersed
Car01g00056 Car-Chr1:304231 Car11g00565 Car-Chr11:3033635 0 wgd
Car10g00638 Car-Chr10:3239659 Car11g00565 Car-Chr11:3033635 5.29E-22 wgd
Car11g00565 Car-Chr11:3033635 Car14g01122 Car-Chr14:9909983 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89175 PF07714 PK_Tyr_Ser-Thr 5.60E-40 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00565 - - csv:101208373 1179.08