Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00576 ATGGAGGTTCTGGTTCCAACTATTCTTCACCTACTGATTCTTTTGGTCACTGTTCATGCTTCCGAGCTTCGGGACATTGCAGAGCCTTATATCTCTCCAGCAGTAGCTCTTTCCCCTAATAATGCATTACCACCTCTGAATCCTTCCCCGGAAGAAGCTCCTTCCCCTCACAATGACATGGGACACTCTCATGATGCTGAACAGCCAATTCTTCCACCACAAGAAGCTCATGATGTTGAACAGCCAAATGAAGATTGTTCGGCTACCCTATGCACCGATCCGTATACAAATACTCCCCCGGGATCCCCCTGTGGTTGTGTTTGGCCCATACAAGTTCGACTTCGTTTCAGTGTTCCCCTCTATACCTTCTTCCCCCTAGTTTCAGAGCTGGCTGCTGAAATTGCTGCTGGGGTATATGTAAAGCGAAGTCAAGTTCGTGTTATTGAGGCCAATGCAGCTTATCAGCAACCAGATAAGACTGTTGCCCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAAAAAGTTTCTATCAAAGCTTACTATTTCGGGAACTATGAAGTGTTATACGTTCGATATCCAGGTTTGCCTCGATCGCCCCCTCCTGGAGTTTCAGGGCTAGATAATGAGCCTCATTTGACTAATACTAACAACGCGAGGACAGTAAAACCCGTCGGTGTCGATGTGCACAACAGACAGCCAAAAGATAGAATAAGTGATGGTATGATCGCTATCATCACCCTATCAACTACTGTTGCAGTGGGCTCATGTCTTGTTACTGCTTGGATTTTGATCTTTACACACAATGATGCAAAACCAAATCCACATGTTTCGTTATCCGCCCTCAATAAGCCATCAGGTGGTGGTGGATTAGTTATGGCAACCATGCCTAGTTCTGCCTCTTTATCCTTTGGATATAGCATTGCTTCATATTCAGGATCAGCCAAGATCTTCAGTGCCTCTGACATAGAGAGAACCACAAATAATTTTGATCCTTCAAGAATACTGGGGGAGGGTGGGTTTGGACGTGTTTACAGTGGCACGCTCGAAGATGGTATCGAAGTAGCAATCAAAGTTCTCAAGAGAGATGATCATCAGGGCGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGCCGCCTCCACCACAGAAATTTGGTCAAGTTGATTGGAATATGTACTGAGGAGCATAACTGTTCCCTGGTGTATGAACTTGTTCCAAATGGCAGTGTTGAATCTCATTTACATGGTATAGATAAGGAAACTGGCCTACTTGATTGGGGTGCCAGGATGAAGATAGCGCTGGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCGAGTCCTAGAGTCATACATCGAGATTTCAAATCGAGTAATATCTTACTAGAACATGATTTTACACCAAAAGTTTCCGACTTCGGGTTGGCTCGAACTGCAACAGATGAGGAAAGCAGACACATAACTACACATGTCATGGGAACTTTCGGGTACGTGGCTCCAGAGTATGCAATGACTGGCCATCTACTTGTGAAGAGTGATGTTTATAGTTACGGAGTTGTTCTACTTGAACTATTAACAGGTAGGAAACCAATTGATATGTCTCAACCACCCGGTGAAGAAAATCTCGTTGCTTGGGCTCGTCCACTCCTCACCAGCAAAGAAGGTCTAGATGTTATAATTGATAAATCACTAGATTCCAATGTTCCTTTTGAAAACATTGCCAAAGTTGCAGCAATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACACCGACCTTTCATGAGTGAGGTCGTTCAAGCATTGAAACTAGTTTGCAACCAATGTGATGAGGTTCAAGAAACAAGCTCGCAAACTAATTCGAGCTCAAAGAATTCATTTGTGGATATGAATGATGAAGCTTCGAGTTCAAAACTCATGCTAGACTCTTTTCATAGCGAATATTTAGTACCTAACTCAATTTCAGGTCTTGATGGTATCGATACACGTCTCTCGATTTCAGACTTGTTAAATACTTCCATCAATATGGGAATGCAAGAATCAAGATCACTCAGAAGATGCTTCAGTTCCGCTCCTCTTAGAATCGAGAAAAGCAAAAGAAATTTTTGGCAAAGAATGAGAAGTAGCATGAGTGAACATGGAATGCCTAGATTATCCCATACTCCCTAA 2214 43.18 MEVLVPTILHLLILLVTVHASELRDIAEPYISPAVALSPNNALPPLNPSPEEAPSPHNDMGHSHDAEQPILPPQEAHDVEQPNEDCSATLCTDPYTNTPPGSPCGCVWPIQVRLRFSVPLYTFFPLVSELAAEIAAGVYVKRSQVRVIEANAAYQQPDKTVALIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKAYYFGNYEVLYVRYPGLPRSPPPGVSGLDNEPHLTNTNNARTVKPVGVDVHNRQPKDRISDGMIAIITLSTTVAVGSCLVTAWILIFTHNDAKPNPHVSLSALNKPSGGGGLVMATMPSSASLSFGYSIASYSGSAKIFSASDIERTTNNFDPSRILGEGGFGRVYSGTLEDGIEVAIKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEHNCSLVYELVPNGSVESHLHGIDKETGLLDWGARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTATDEESRHITTHVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNVPFENIAKVAAIASMCVQPEVSHRPFMSEVVQALKLVCNQCDEVQETSSQTNSSSKNSFVDMNDEASSSKLMLDSFHSEYLVPNSISGLDGIDTRLSISDLLNTSINMGMQESRSLRRCFSSAPLRIEKSKRNFWQRMRSSMSEHGMPRLSHTP 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3122182 3126204 - Carg21960-RA Car11g00576 156529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00576 737 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Car11g00576 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Car11g00576 737 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00576 737 Pfam Protein tyrosine and serine/threonine kinase 348 617 IPR001245 GO:0004672|GO:0006468
Car11g00576 737 MobiDBLite consensus disorder prediction 42 70 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00648 Car11g00576 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00576 Car-Chr11:3122182 Car14g00853 Car-Chr14:5024085 6.34E-118 dispersed
Car19g00103 Car-Chr19:840488 Car11g00576 Car-Chr11:3122182 5.47E-19 dispersed
Car10g00648 Car-Chr10:3304194 Car11g00576 Car-Chr11:3122182 7.97E-08 wgd
Car11g00576 Car-Chr11:3122182 Car17g00679 Car-Chr17:6274437 1.12E-16 wgd
Car11g00576 Car-Chr11:3122182 Car08g00653 Car-Chr8:4206690 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89176 PF07714 PK_Tyr_Ser-Thr 1.50E-49 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00576 - - cmax:111466443 1377.84