Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00590 ATGGAGAATCATCAGGAGGTTGAAAGCGAGGAAGAAGATGGAGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAATTGGAGTCGTGGGTTCGAGCTTGACTTTGGAGAAGGTCGCTGCGGCTAAACAGTATATTGAGAATCATTACAAGGCTCAAAAGAAACATATTCAAGAACGCAAAGAGAGGCGTTCCTTGCTAGAAAGGAGGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCACAAGGAGACTCAATACATTCGTCTCAAAAGGAATAAGATTTGTGTTGAGGATTTTGACCTTTTGACAATTATTGGGCGAGGTGCTTTTGGGGAGGTTAGACTTTGTCGGGAGAAGAAAACAGGCAACATATATGCTATGAAGAAGCTGAAGAAATCAGAAATGCTCAGTAGAGGACAGGTTGAACATGTCAGAGCTGAAAGAAATTTGCTTGCAGAAGTTGCAAGTCACTACATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTAATCATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTGATAAGGGAAGAAACTTTGACAGAAATCGTAGCCAGATTTTACATCGCTCAAAGCGTTCTAGCTATCGAGTCGATTCATACACATAACTACATTCACAGAGACATAAAACCGGACAACCTTCTTTTGGACCAAAGGGGTCATATGAAACTGTCTGATTTTGGTCTTTGCAAACCTCTTGACTGTTCAAATCTATCTTCTATAAATGAAAATGAAGTCCTTGACGACGATAACTTGCACGACACGGTGGATGTCGATGCAAGCGTTCCGGGGAAGAAAAGTGGGAGGCGTTGGAAGAGCCCCCTTGAACAACTTCAACATTGGCAGATTAACAGAAGGAAACTGGCATTCTCCACGGTTGGCACTCCAGATTATATAGCTCCAGAAGTGTTGCTTAAAAAAGGATACGGTGTTGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGGTTATCACCTGAAGCAAAGGACCTGATTAGTAGGCTGCTTTGTGATGCAGACCATCGGCTTGGGACCGGAGACGTCGACCAAATAAAGACTCATCCTTGGTTCAAAGATATCGAGTGGGACAAACTCTATGATATAGATGCAGCATTTAAGCCTGAGGTCAATGGGGAACTTGATACGCAGAACTTCATGCAATTTGATGAGGTGAGGTCTTCTACATAA 1365 42.2 MENHQEVESEEEDGVAEEEEEEEEEEEIGVVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSLLERRLASSDVSEEEQINLLKDLEHKETQYIRLKRNKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHYIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTEIVARFYIAQSVLAIESIHTHNYIHRDIKPDNLLLDQRGHMKLSDFGLCKPLDCSNLSSINENEVLDDDNLHDTVDVDASVPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDLISRLLCDADHRLGTGDVDQIKTHPWFKDIEWDKLYDIDAAFKPEVNGELDTQNFMQFDEVRSST 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3197413 3201903 + Carg21946-RA Car11g00590 156543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00590 454 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 454 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car11g00590 454 MobiDBLite consensus disorder prediction 1 33 - -
Car11g00590 454 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Car11g00590 454 Pfam Protein kinase domain 111 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00590 454 Pfam Protein kinase domain 309 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00590 454 Coils Coil 1 27 - -
Car11g00590 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Car11g00590 454 ProSiteProfiles Protein kinase domain profile. 109 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00590 454 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00664 Car11g00590 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00590 Car-Chr11:3197413 Car17g00140 Car-Chr17:866008 0 dispersed
Car01g01334 Car-Chr1:11873160 Car11g00590 Car-Chr11:3197413 0 wgd
Car10g00664 Car-Chr10:3399497 Car11g00590 Car-Chr11:3197413 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89177 PF00069 Pkinase 3.20E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00590 K08790 - csv:101208238 796.193