Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00592 ATGAGGAAGGGAGGCTTAAGCAACAATCTCGACCTCAAACTCAGTCTCCCTCAAGAAGACCAATCCATAGCCAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTTGTAAACAGAGATGGAGTTCGGATTGTTTCTCAGAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACACAATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTGAGATGAAAATTGAGGAGTCTTACCGCAGGCAGATTGCTAAAGAACTGAAAATCAATCAATCAGCACAGTGTCCCTATATTGTTGTCTGTTACCAATCTTTCTATGATAATGGGTCAATATATATCATTTTAGAGTACATGGATGGTGGATCTTTAGCTGATTTTCTGAAAAAGGTTAAAAAAATTGAAGAACCATATCTTGCTGCCATTTGTAAGCAGGTGCTGAAGGGGCTGATGTACCTTCACCATGAAAGACACATTATCCATAGGGACTTGAAGCCTTCTAATTTATTAGTAAATCATAGAGGGGAAGTCAAGATTACCGACTTTGGTGTGAGTGCGATTATGGCAAGCACAACTGGAGAGGCTAATACTTTCGTTGGCACATATAACTACATGTCTCCAGAGAGAATTGTTGGAAATAGATATGGCAAAAAAAGTGACATTTGGAGCTTGGGTCTGATATTACTTGAATGTGCAACCGGCAAATTCCCTTATTCTCCACCCGAGAAAGATGGAGGATGGGGTAACTTTTATGATCTTATGGTAGCCATTGCTGAGGGCGAACCTCCTTCTGCTCCAGCCGACCAGTTTACTCCTAACTTCTGTTCCTTCATTTCTGCATGTTTGCAAACGGAGCCGAAGGATAGACTGTCAGCACGTGAACTTTTGGAACACCCTTTCGTCAACATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAATGATGCAGGGACTCCACTTGCAACGTTCTAA 1068 41.76 MRKGGLSNNLDLKLSLPQEDQSIAKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDTIKVIGKGNGGTVQLVQHKWTAQFFALKVIEMKIEESYRRQIAKELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIEEPYLAAICKQVLKGLMYLHHERHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMASTTGEANTFVGTYNYMSPERIVGNRYGKKSDIWSLGLILLECATGKFPYSPPEKDGGWGNFYDLMVAIAEGEPPSAPADQFTPNFCSFISACLQTEPKDRLSARELLEHPFVNMYEDTDIDLSSYFNDAGTPLATF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3218237 3221944 - Carg21944-RA Car11g00592 156545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00592 355 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Car11g00592 355 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00592 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Car11g00592 355 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00666 Car11g00592 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00592 Car-Chr11:3218237 Car12g01246 Car-Chr12:11767614 1.04E-25 dispersed
Car10g00666 Car-Chr10:3423175 Car11g00592 Car-Chr11:3218237 0 wgd
Car11g00592 Car-Chr11:3218237 Car12g01289 Car-Chr12:11950390 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89178 PF00069 Pkinase 2.20E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00592 K20603 - csv:101204545 655.981