Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00596 | ATGAGTGGACCAGTTAACATCATTGTTGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCATGGATTGATGGTGAAGTTTTTCGTATCAATGGAGAGGAAATTCACGTCCGGACTACAAATGGGAAGACGGTTGTTGCAAATATATCAAAAATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGTTGTCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCTACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCCATAAATCCATTCCAAAGATTACCCCATCTGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTACCTTGCATACCTTGGAGGCCGATCTGGAGTGGAAGGACGAACAGTTGAACAACAAGTCCTGGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCGAAAACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGGAGAATATCTGGGGCAGCTGTCAGAACTTATTTGCTCGAAAGGTCTCGAGTATGTCAGATCTCAGATCCTGAAAGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGGAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAATCAACGATGCCCATGAATATCTTGCGACCAGAAGAGCGATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATGTTGAATTTGCAAAGGGAGAAGAGATTGATTCTTCAGTCATTAAGGACGAAAAATCCAGATTCCATCTCAATACCACTGCCGAATTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACTCTTGATCCTGTTGCTGCATTGGGTAGTAGGGATGCCTTGGCTAAAACGATCTATTCACGGCTCTTCGACTGGCTCGTGGAGAAGATTAACAACTCAATTGGACAAGACCCAAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGCTTCGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGGAGATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATTATTGCTCTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTCGCTCAGAAGTTATACCAGACGTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGCTTCACAATATCTCATTATGCTGGAGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTATGTGGTAGCAGAGCATCAGGCCTTATTGACAGCCTCAAAATGCTCCTTTGCTAGAGCTCTATTTCCTCCTCAACCAGAGGAATCATCAAAATCCTCAAAATTTTCTTCCATCGGTTCACGTTTTAAGTTGCAACTTCAATCTTTAATGGAGACCTTGAATTCGACAGAACCTCACTATATCAGATGTGTCAAGCCAAATAATGTGCTCAAGCCTGCTATATTCGAGAACTCAAATGTTATCCAGCAATTACGTTGTGGTGGTGTTCTTGAAGCAATAAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTCGGGGTTCTTGCACCTGAAGTTCTGGATGGGAACTATGACGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGATGCTTAGCAACGCTGCCCGAACTATTCAAATGCAAATTCGAACATTTATTGCACGCAAGGAGTTCGTTGCATTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTCGAGCAGTTGAGACAGGAAGCAGCAGCTTTAAGAATCCAGAAGTGTTTCAAGCGACATGTTGCCAGGAAGTCGTACTTAGATTTGCTCTCATCTGCAACCACATTGCAAACAGGGTTAAGGGCGATGAAGGCTCGTGATGAGTTCAGATTTAGGAAGCGTACGAAGGCAGCAATTATCATTCAGGCACGTTGGCGTTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAATGTGGTTGGAGACGACGAGTTGCACGAAAGGAGCTAAGACAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTCGAGAAGCGGTTGAGGACTGATCTGGAAGAGGAGAAAGCCCAGGAAATCGCCAAATTACAAGACGCTTTGCACGGTATGCAATTACAAGTTGAAGAAGCCAACGCTCAAGTTATCAAAGAGCGAGAGGCGGCTAAGAAAGCTATTGAAGAAGCGCCTCCGGTCGTCAAGGAAACTCCTGTTTTTGTTGAGGATACTGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTGAAGGCTTTGCTGCTGTCAGAGAAAAAGACATCCGAAGAGGCGAGAAAAGCATGTACAGATGCTGAAGCGAAAAATGTGGAGCTGTCTAAAAAACTTCAAGATGCAGACCAAAAGGTCGATCAACTTCAGGAGTCGGTGCAGAGGCTTGAAGAGAAGCTCTCAAATTCCGAATCAGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAACAGGAAAAGCTTTATCTGCGAGACCGAAGTCGGTGATCATTCAGAGGACACCAGAGAATGGAAACATTCCACATGGAGAAGCCAAAGTATCATCTGATACAACTCTAGCATTATCGACGATACGTGAACCTGAATCAGAGGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAAGACCTGCTAGTGAAGTGCATAACACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTTATATACAAATGTCTTCTTCACTGGAGGTCGTTCGAAGTCGAAAGAACGAGCATATTCGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCAGGATAACAATGACGTATTAACTTATTGGTTATCGAATACGTCGACGTTATTGTTGCTTCTTCAACACACTCTCAAAGCAAGTGGAGCTGCTAGCTTGACCCCTCAAAGAAGGAGAACTGCTTCTTCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTAAGTAGCCGGGGGCTCGGTAGGTTGGACGATTTTCGGCAGGTCGAGGCGAAGTATCCAGCTCTGTTGTTTAAGCAACAGCTTACAGCATTCTTGGAGAAAATATATGGAATGATAAGAGACAACCTCAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGTAGCTCTCAAATCTTATCATTCCTCCAACAATGGAACGATAAAGAAACTGCTGTTAGAACGTTATGTCGATGAGCCGGAGCTTCATTTATTCATTTCTATGCAGGCTCCTAGGACGTCACGAGCAAGCTTAGTGAAAGGACGCTCCCAAGCTAACGCTATTGCTCAGCAGGCCTTAATTGCTCATTGGCAAAGCATTGTGAAAAGTTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTGCATTCTTAGTCCGCAAAGTCTTCACTCAGATATTCTCGTTTATTAACGTTCAACTATTCAACAGCCTTCTTTTGCGGCGCGAGTGTTGTTCGTTCAGCAATGGAGAGTATGTCAAAGCTGGCTTGTCTGAATTAGATCAATGGTGTTCTGGGGCAACTGAGGAATATGCAGGCTCGGCTTGGGACGAATTAAAGCATATTAGGCAGGCTGTTGGATTCCTTGTCATACATCAAAAACCGAAAAAGACGTTGAACGAGATAACTAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACTATGTACTGGGATGACAAATACGGCACGCATAGTGTATCCTCGGAAGTTATTTCGAGTATGCGAAAACTGATGACCGAAGACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGTATCCCATTTTCAGTGGACGACATCTCGAAATCAATGAAACAAGTAGACGTAACAGACATCGATCCTCCACCGCTGATACGCGAAAACTCAGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTAG | 4605 | 42.45 | MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEIHVRTTNGKTVVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGDPKSFHYLNQSKCFELDGINDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEMLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARKLFEQLRQEAAALRIQKCFKRHVARKSYLDLLSSATTLQTGLRAMKARDEFRFRKRTKAAIIIQARWRCHMAYSYYTRLQKAALYTQCGWRRRVARKELRQLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALHGMQLQVEEANAQVIKEREAAKKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKALLLSEKKTSEEARKACTDAEAKNVELSKKLQDADQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSVIIQRTPENGNIPHGEAKVSSDTTLALSTIREPESEEKPQKSLNEKQQENQDLLVKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLSSRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQVALKSYHSSNNGTIKKLLLERYVDEPELHLFISMQAPRTSRASLVKGRSQANAIAQQALIAHWQSIVKSLNNYLKIMKANYVPAFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELDQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRKLMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE | 1534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3231929 | 3245473 | + | Carg21940-RA | Car11g00596 | 156549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 776 | 805 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 801 | 827 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 824 | 853 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Coils | Coil | 893 | 927 | - | - | |
Car11g00596 | 1534 | ProSiteProfiles | Myosin motor domain profile. | 62 | 702 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car11g00596 | 1534 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 705 | 734 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | ProSiteProfiles | Dilute domain profile. | 1132 | 1478 | IPR002710 | - | |
Car11g00596 | 1534 | Pfam | DIL domain | 1354 | 1457 | IPR002710 | - | |
Car11g00596 | 1534 | Pfam | Myosin head (motor domain) | 64 | 109 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car11g00596 | 1534 | Pfam | Myosin head (motor domain) | 112 | 690 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car11g00596 | 1534 | Pfam | IQ calmodulin-binding motif | 729 | 748 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Pfam | IQ calmodulin-binding motif | 802 | 821 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Pfam | IQ calmodulin-binding motif | 755 | 773 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Pfam | IQ calmodulin-binding motif | 707 | 725 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 728 | 757 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Coils | Coil | 966 | 1021 | - | - | |
Car11g00596 | 1534 | ProSiteProfiles | IQ motif profile. | 753 | 782 | IPR000048 | GO:0005515 | |
Car11g00596 | 1534 | Coils | Coil | 847 | 888 | - | - | |
Car11g00596 | 1534 | Pfam | Myosin N-terminal SH3-like domain | 9 | 50 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00670 | Car11g00596 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g00246 | Car-Chr8:1546369 | Car11g00596 | Car-Chr11:3231929 | 0 | dispersed | |
Car11g00596 | Car-Chr11:3231929 | Car17g01260 | Car-Chr17:9556230 | 0 | dispersed | |
Car17g01227 | Car-Chr17:9335875 | Car11g00596 | Car-Chr11:3231929 | 0 | dispersed | |
Car12g01112 | Car-Chr12:10831623 | Car11g00596 | Car-Chr11:3231929 | 0 | transposed | |
Car10g00670 | Car-Chr10:3442085 | Car11g00596 | Car-Chr11:3231929 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00596 | K10357 | - | csv:101204300 | 2736.44 |