Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00596 ATGAGTGGACCAGTTAACATCATTGTTGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCATGGATTGATGGTGAAGTTTTTCGTATCAATGGAGAGGAAATTCACGTCCGGACTACAAATGGGAAGACGGTTGTTGCAAATATATCAAAAATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGTTGTCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCTACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCCATAAATCCATTCCAAAGATTACCCCATCTGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTACCTTGCATACCTTGGAGGCCGATCTGGAGTGGAAGGACGAACAGTTGAACAACAAGTCCTGGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCGAAAACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGGAGAATATCTGGGGCAGCTGTCAGAACTTATTTGCTCGAAAGGTCTCGAGTATGTCAGATCTCAGATCCTGAAAGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGGAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAATCAACGATGCCCATGAATATCTTGCGACCAGAAGAGCGATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATGTTGAATTTGCAAAGGGAGAAGAGATTGATTCTTCAGTCATTAAGGACGAAAAATCCAGATTCCATCTCAATACCACTGCCGAATTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACTCTTGATCCTGTTGCTGCATTGGGTAGTAGGGATGCCTTGGCTAAAACGATCTATTCACGGCTCTTCGACTGGCTCGTGGAGAAGATTAACAACTCAATTGGACAAGACCCAAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGCTTCGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGGAGATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATTATTGCTCTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTCGCTCAGAAGTTATACCAGACGTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGCTTCACAATATCTCATTATGCTGGAGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTATGTGGTAGCAGAGCATCAGGCCTTATTGACAGCCTCAAAATGCTCCTTTGCTAGAGCTCTATTTCCTCCTCAACCAGAGGAATCATCAAAATCCTCAAAATTTTCTTCCATCGGTTCACGTTTTAAGTTGCAACTTCAATCTTTAATGGAGACCTTGAATTCGACAGAACCTCACTATATCAGATGTGTCAAGCCAAATAATGTGCTCAAGCCTGCTATATTCGAGAACTCAAATGTTATCCAGCAATTACGTTGTGGTGGTGTTCTTGAAGCAATAAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTCGGGGTTCTTGCACCTGAAGTTCTGGATGGGAACTATGACGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGATGCTTAGCAACGCTGCCCGAACTATTCAAATGCAAATTCGAACATTTATTGCACGCAAGGAGTTCGTTGCATTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTCGAGCAGTTGAGACAGGAAGCAGCAGCTTTAAGAATCCAGAAGTGTTTCAAGCGACATGTTGCCAGGAAGTCGTACTTAGATTTGCTCTCATCTGCAACCACATTGCAAACAGGGTTAAGGGCGATGAAGGCTCGTGATGAGTTCAGATTTAGGAAGCGTACGAAGGCAGCAATTATCATTCAGGCACGTTGGCGTTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAATGTGGTTGGAGACGACGAGTTGCACGAAAGGAGCTAAGACAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTCGAGAAGCGGTTGAGGACTGATCTGGAAGAGGAGAAAGCCCAGGAAATCGCCAAATTACAAGACGCTTTGCACGGTATGCAATTACAAGTTGAAGAAGCCAACGCTCAAGTTATCAAAGAGCGAGAGGCGGCTAAGAAAGCTATTGAAGAAGCGCCTCCGGTCGTCAAGGAAACTCCTGTTTTTGTTGAGGATACTGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTGAAGGCTTTGCTGCTGTCAGAGAAAAAGACATCCGAAGAGGCGAGAAAAGCATGTACAGATGCTGAAGCGAAAAATGTGGAGCTGTCTAAAAAACTTCAAGATGCAGACCAAAAGGTCGATCAACTTCAGGAGTCGGTGCAGAGGCTTGAAGAGAAGCTCTCAAATTCCGAATCAGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAACAGGAAAAGCTTTATCTGCGAGACCGAAGTCGGTGATCATTCAGAGGACACCAGAGAATGGAAACATTCCACATGGAGAAGCCAAAGTATCATCTGATACAACTCTAGCATTATCGACGATACGTGAACCTGAATCAGAGGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAAGACCTGCTAGTGAAGTGCATAACACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTTATATACAAATGTCTTCTTCACTGGAGGTCGTTCGAAGTCGAAAGAACGAGCATATTCGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCAGGATAACAATGACGTATTAACTTATTGGTTATCGAATACGTCGACGTTATTGTTGCTTCTTCAACACACTCTCAAAGCAAGTGGAGCTGCTAGCTTGACCCCTCAAAGAAGGAGAACTGCTTCTTCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTAAGTAGCCGGGGGCTCGGTAGGTTGGACGATTTTCGGCAGGTCGAGGCGAAGTATCCAGCTCTGTTGTTTAAGCAACAGCTTACAGCATTCTTGGAGAAAATATATGGAATGATAAGAGACAACCTCAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGTAGCTCTCAAATCTTATCATTCCTCCAACAATGGAACGATAAAGAAACTGCTGTTAGAACGTTATGTCGATGAGCCGGAGCTTCATTTATTCATTTCTATGCAGGCTCCTAGGACGTCACGAGCAAGCTTAGTGAAAGGACGCTCCCAAGCTAACGCTATTGCTCAGCAGGCCTTAATTGCTCATTGGCAAAGCATTGTGAAAAGTTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTGCATTCTTAGTCCGCAAAGTCTTCACTCAGATATTCTCGTTTATTAACGTTCAACTATTCAACAGCCTTCTTTTGCGGCGCGAGTGTTGTTCGTTCAGCAATGGAGAGTATGTCAAAGCTGGCTTGTCTGAATTAGATCAATGGTGTTCTGGGGCAACTGAGGAATATGCAGGCTCGGCTTGGGACGAATTAAAGCATATTAGGCAGGCTGTTGGATTCCTTGTCATACATCAAAAACCGAAAAAGACGTTGAACGAGATAACTAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACTATGTACTGGGATGACAAATACGGCACGCATAGTGTATCCTCGGAAGTTATTTCGAGTATGCGAAAACTGATGACCGAAGACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGTATCCCATTTTCAGTGGACGACATCTCGAAATCAATGAAACAAGTAGACGTAACAGACATCGATCCTCCACCGCTGATACGCGAAAACTCAGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTAG 4605 42.45 MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEIHVRTTNGKTVVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGDPKSFHYLNQSKCFELDGINDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEMLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARKLFEQLRQEAAALRIQKCFKRHVARKSYLDLLSSATTLQTGLRAMKARDEFRFRKRTKAAIIIQARWRCHMAYSYYTRLQKAALYTQCGWRRRVARKELRQLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALHGMQLQVEEANAQVIKEREAAKKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKALLLSEKKTSEEARKACTDAEAKNVELSKKLQDADQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSVIIQRTPENGNIPHGEAKVSSDTTLALSTIREPESEEKPQKSLNEKQQENQDLLVKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLSSRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQVALKSYHSSNNGTIKKLLLERYVDEPELHLFISMQAPRTSRASLVKGRSQANAIAQQALIAHWQSIVKSLNNYLKIMKANYVPAFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELDQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRKLMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE 1534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3231929 3245473 + Carg21940-RA Car11g00596 156549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00596 1534 ProSiteProfiles IQ motif profile. 776 805 IPR000048 GO:0005515
Car11g00596 1534 ProSiteProfiles IQ motif profile. 801 827 IPR000048 GO:0005515
Car11g00596 1534 ProSiteProfiles IQ motif profile. 824 853 IPR000048 GO:0005515
Car11g00596 1534 Coils Coil 893 927 - -
Car11g00596 1534 ProSiteProfiles Myosin motor domain profile. 62 702 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car11g00596 1534 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car11g00596 1534 ProSiteProfiles IQ motif profile. 705 734 IPR000048 GO:0005515
Car11g00596 1534 ProSiteProfiles Dilute domain profile. 1132 1478 IPR002710 -
Car11g00596 1534 Pfam DIL domain 1354 1457 IPR002710 -
Car11g00596 1534 Pfam Myosin head (motor domain) 64 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car11g00596 1534 Pfam Myosin head (motor domain) 112 690 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car11g00596 1534 Pfam IQ calmodulin-binding motif 729 748 IPR000048 GO:0005515
Car11g00596 1534 Pfam IQ calmodulin-binding motif 802 821 IPR000048 GO:0005515
Car11g00596 1534 Pfam IQ calmodulin-binding motif 755 773 IPR000048 GO:0005515
Car11g00596 1534 Pfam IQ calmodulin-binding motif 707 725 IPR000048 GO:0005515
Car11g00596 1534 ProSiteProfiles IQ motif profile. 728 757 IPR000048 GO:0005515
Car11g00596 1534 Coils Coil 966 1021 - -
Car11g00596 1534 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Car11g00596 1534 Coils Coil 847 888 - -
Car11g00596 1534 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00670 Car11g00596 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00246 Car-Chr8:1546369 Car11g00596 Car-Chr11:3231929 0 dispersed
Car11g00596 Car-Chr11:3231929 Car17g01260 Car-Chr17:9556230 0 dispersed
Car17g01227 Car-Chr17:9335875 Car11g00596 Car-Chr11:3231929 0 dispersed
Car12g01112 Car-Chr12:10831623 Car11g00596 Car-Chr11:3231929 0 transposed
Car10g00670 Car-Chr10:3442085 Car11g00596 Car-Chr11:3231929 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00596 K10357 - csv:101204300 2736.44