Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00602 | ATGTGCACCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCCGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTACCTTGGACTCTCCTTTCACTTCTAAGCTTTTCCCCCACCATCCTCAACATGTAGGGTGGAACTATTTGCAAATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACGACAGCAACAAATGATATTAACCGCCTTTCAAATCCAGCGTTTTCTTCCCTAACCAACAATTCATCCCTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTTCTAATGGGAATGGCATATCACCCCAAGACACTAATACCCTCTTGCTTCTGGAATCTGGTTCTTACTCGGACAGAAACCCAGATTACAGTATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAACAAGAAGAAGTAGGGACACTTATGGGCTAAAAGAGAAAGTAGATGAGTATGCCTTCTTCTCGCAAGAACCATCTGAAACTGCTGCAAGAGCCGATTCTCTGCAACTGACACCACTAACGATGAGTTGTTCTTCTCTATATCCAAAACAGAACAACTGCTCTTCTTTGCAGAATGATCAGTCCTGCTATCAGCTTCATCAGAGCCTCGCAGACCCTTTGAAGCAACAAAAGAGAGATGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAGAGAGGATCACGGCTTGATTTCGAAGATAAATCATCAAATACTGGCTCAGTTCCCACCATTCGGCCCTCAACTTCCATTCCCACCACTTCCAATGACTTCCCCATTTTCGGATTCAACAACCCA | 1017 | 43.95 | MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3289920 | 3291058 | - | Carg21934-RA | Car11g00602 | 156555 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00602 | 339 | MobiDBLite | consensus disorder prediction | 295 | 339 | - | - | |
Car11g00602 | 339 | Pfam | WRC | 77 | 118 | IPR014977 | - | |
Car11g00602 | 339 | ProSiteProfiles | QLQ domain profile. | 8 | 43 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Car11g00602 | 339 | Pfam | QLQ | 8 | 41 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Car11g00602 | 339 | MobiDBLite | consensus disorder prediction | 307 | 339 | - | - | |
Car11g00602 | 339 | ProSiteProfiles | WRC domain profile. | 76 | 120 | IPR014977 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g01337 | Car11g00602 | CCT | |
Car05g01337 | Car11g00602 | ECH | |
Car10g00681 | Car11g00602 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00602 | Car-Chr11:3289920 | Car12g01280 | Car-Chr12:11916386 | 6.31E-08 | dispersed | |
Car01g00027 | Car-Chr1:139119 | Car11g00602 | Car-Chr11:3289920 | 4.13E-68 | wgd | |
Car10g00681 | Car-Chr10:3535618 | Car11g00602 | Car-Chr11:3289920 | 0 | wgd | |
Car11g00602 | Car-Chr11:3289920 | Car14g01092 | Car-Chr14:9566099 | 3.10E-67 | wgd | |
Car11g00602 | Car-Chr11:3289920 | Car05g01337 | Car-Chr5:12104148 | 1.32E-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4276 | PF08879 | WRC | 1.20E-20 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00602 | - | - | cmax:111467370 | 569.311 |