Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00602 ATGTGCACCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCCGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTACCTTGGACTCTCCTTTCACTTCTAAGCTTTTCCCCCACCATCCTCAACATGTAGGGTGGAACTATTTGCAAATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACGACAGCAACAAATGATATTAACCGCCTTTCAAATCCAGCGTTTTCTTCCCTAACCAACAATTCATCCCTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTTCTAATGGGAATGGCATATCACCCCAAGACACTAATACCCTCTTGCTTCTGGAATCTGGTTCTTACTCGGACAGAAACCCAGATTACAGTATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAACAAGAAGAAGTAGGGACACTTATGGGCTAAAAGAGAAAGTAGATGAGTATGCCTTCTTCTCGCAAGAACCATCTGAAACTGCTGCAAGAGCCGATTCTCTGCAACTGACACCACTAACGATGAGTTGTTCTTCTCTATATCCAAAACAGAACAACTGCTCTTCTTTGCAGAATGATCAGTCCTGCTATCAGCTTCATCAGAGCCTCGCAGACCCTTTGAAGCAACAAAAGAGAGATGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAGAGAGGATCACGGCTTGATTTCGAAGATAAATCATCAAATACTGGCTCAGTTCCCACCATTCGGCCCTCAACTTCCATTCCCACCACTTCCAATGACTTCCCCATTTTCGGATTCAACAACCCA 1017 43.95 MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3289920 3291058 - Carg21934-RA Car11g00602 156555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00602 339 MobiDBLite consensus disorder prediction 295 339 - -
Car11g00602 339 Pfam WRC 77 118 IPR014977 -
Car11g00602 339 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car11g00602 339 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car11g00602 339 MobiDBLite consensus disorder prediction 307 339 - -
Car11g00602 339 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01337 Car11g00602 CCT
Car05g01337 Car11g00602 ECH
Car10g00681 Car11g00602 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00602 Car-Chr11:3289920 Car12g01280 Car-Chr12:11916386 6.31E-08 dispersed
Car01g00027 Car-Chr1:139119 Car11g00602 Car-Chr11:3289920 4.13E-68 wgd
Car10g00681 Car-Chr10:3535618 Car11g00602 Car-Chr11:3289920 0 wgd
Car11g00602 Car-Chr11:3289920 Car14g01092 Car-Chr14:9566099 3.10E-67 wgd
Car11g00602 Car-Chr11:3289920 Car05g01337 Car-Chr5:12104148 1.32E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4276 PF08879 WRC 1.20E-20 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00602 - - cmax:111467370 569.311