Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00610 ATGACGATGAAGAAAAAAGCTTCATGGCGGTGGTTGTTGCCGCCGATGTGCGGCGGCGATTTGCCGGCGCAGGCGACAAAGAAGGTGGCGGCAAAGCAAACCTCTTTCAACAAGAGAATTTCCCAGCTGGATTTAAGCAATCCCAATTCTGTCCTGTCCGAAGACCTTTCCATGTCCCTCGCCGGCTCTAACATCCATATGTTCACTTTGGGAGAGATTAAGGTCATGACTCAAAGTTTCTCCACCGGAAATTTCATCGGAGAAGGCGGGTTCGGTCCGGTTTATAAAGGGTTCATCGACGACAAGCTTCGCCTTGGCCTCAAGGCTCAGCCGGTCGCTGTCAAGCTCTTGGACTTGGATGGCACACAAGGACACCGCGAGTGGCTGACGGAGGTGATCTTTTTGGGACAATTACGGCATCCCCATTTGGTGAAATTGATTGGATATTGCTGTGAAGATGAACATAGAGTGTTGGTTTATGAGTATATGCCAAGAGGGAGCTTGGAGAATCAGCTGTTTAGAAGATTTTCGGTGTCGTTGCCATGGTCGACAAGAATGAAAATAGCTTTAGGAGCTGCGAAGGGATTAGCGTTTCTTCATGAAGCTGAAAAACCCGTCATTTATCGAGATTTCAAAGCTTCGAATATCTTATTAGATTCGGATTACAATGCAAAGCTCTCGGATTTTGGGTTGGCTAAAGATGGCCCTGATGGAGACGATACCCATGTCTCCACCCGAGTCATGGGTACTGAAGGCTATGCTGCTCCTGAATATGTCATGACTGGTCACTTGACGGCAATGAGTGATGTGTATAGTTTTGGAGTGGTTCTTTTAGAGATGTTGACGGGACGACGATCGTTAGAGAGAAACCGGCCGAACCGAGAGCAAAACTTGGTGGAATTCGCGAGACCAATGTTAAACGACAACCGAAGGCTGAGTCGAATAATAGATAGTAGACTCGAAGGACAATATTCGGAGATTGGAGCTAGAAAGGCAGCGGCATTGGCGTACCAATGCTTGAGCTACCGCCCGAAGCAGCGGCCAACGATGAGCGAAGTGGTGAAAATTCTAGAGCCATTGAAGGACTACGAAGACATACCGATTGGAACCTTTGTTTTTGTATTGCCGGAGACAGCAGCCACAACCAAGGGAAGTGAGACTCCAAAAGAAGACAACGGAGGAGGAAAGCATAACGGTCATCGTAGACGAGATCATCGCCGTTACCCGAGATCGCCGGTGTCGGAAAGCGGCGGCCGGAGAGCGTAG 1266 48.89 MTMKKKASWRWLLPPMCGGDLPAQATKKVAAKQTSFNKRISQLDLSNPNSVLSEDLSMSLAGSNIHMFTLGEIKVMTQSFSTGNFIGEGGFGPVYKGFIDDKLRLGLKAQPVAVKLLDLDGTQGHREWLTEVIFLGQLRHPHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRFSVSLPWSTRMKIALGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYVMTGHLTAMSDVYSFGVVLLEMLTGRRSLERNRPNREQNLVEFARPMLNDNRRLSRIIDSRLEGQYSEIGARKAAALAYQCLSYRPKQRPTMSEVVKILEPLKDYEDIPIGTFVFVLPETAATTKGSETPKEDNGGGKHNGHRRRDHRRYPRSPVSESGGRRA 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3335484 3337257 + Carg21926-RA Car11g00610 156563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00610 421 Pfam Protein kinase domain 82 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00610 421 MobiDBLite consensus disorder prediction 380 421 - -
Car11g00610 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Car11g00610 421 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01342 Car11g00610 CCT
Car05g01342 Car11g00610 ECH
Car10g00689 Car11g00610 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00152 Car-Chr6:938348 Car11g00610 Car-Chr11:3335484 2.86E-161 dispersed
Car11g00610 Car-Chr11:3335484 Car16g00465 Car-Chr16:2949967 1.46E-147 dispersed
Car14g00002 Car-Chr14:23627 Car11g00610 Car-Chr11:3335484 1.20E-109 dispersed
Car18g00636 Car-Chr18:7675495 Car11g00610 Car-Chr11:3335484 3.97E-30 dispersed
Car01g01311 Car-Chr1:11756567 Car11g00610 Car-Chr11:3335484 5.90E-161 wgd
Car10g00689 Car-Chr10:3575767 Car11g00610 Car-Chr11:3335484 0 wgd
Car11g00610 Car-Chr11:3335484 Car17g00646 Car-Chr17:6046593 7.34E-147 wgd
Car11g00610 Car-Chr11:3335484 Car05g01342 Car-Chr5:12122848 0 wgd
Car11g00610 Car-Chr11:3335484 Car08g00684 Car-Chr8:4382033 1.18E-158 wgd
Car11g00610 Car-Chr11:3335484 Car09g00319 Car-Chr9:1777465 4.02E-162 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89179 PF00069 Pkinase 5.40E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00610 - - csv:101209291 686.411