Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00612 ATGATGGGTACTTCGGAAATCCAAGAGAAAACCAGTCGCCTAGAGACCAGGATGGACACGGCACGCACACAGCAAGCACGGCTGCTGGGTCACATGTGGCTAACGCGAGCTTACTTGGGTATGCCAGAGGCATTGCCAGGGGGATGGCTCCTCAAGCGAGAGTTGCAGCTTACAAAACCTGTTGGTCCACTGGTTGCTTTGGATCTGACATTCTTGCAGGTATGGATCGGGCAATATCCGACGGTGTCGATGTACTCTCACTCTCTTTGGGCGGTGGCTCTGCACCATTATTACCAGGATACCATTGCAATAGGAGCATTTGCAGCCATGGAGAATGGAGTTTTTGTTTCATGCTCAGCTGGGAACAGTGGGCCAAACTTGGCTTCTCTGGCTAATGTGGCACCTTGGATCATGACAGTCGGAGCTGGAACTCTAGACCGGGATTTCCCAGCTTATGTCCAACTAGGAAATGGCAAGCGGTTTACTGGAGTGTCGCTCTACAGTGGCCAAGGAATGAACAAGCCGGTGGGTTTGGTGTACAAAGAAGGAAGCAACACCTCCAGCAACATGTGTTTGCCCGGTTCTCTTGACCCGGAATTGATCAGAGGGAAAGTGGTGGTCTGCGACAGGGGAATCAACGCCAGAGCAGAGAAGGGAGGAGTGGTGCGAGATGCTGGTGGGTTTGGGATGATTCTGGCAAACACAGCTGCTAATGGAGAGAAATTGGTGGCTGACAGCCACTTGCTGCCGGCTGTGGCTGTGGGGAGAATAACCGGCGACATGATCCGGCATTATGTGCGGTCAGTTTCGAAGCCGACGGCGGTGCTAAGCTTTGGTGGGACAGTTGTGAACGTGCGCCCATCTCCGGTGGTGGCGGCTTTCAGTTCCCGAGGACCCAACTTGGTAACGCCCCAAATCCTAAAGCCGGACGTTATTGGGCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGACAGCGACAAGAGAAAAACACAGTTCAATATTATGTCAGGAACATCCATGTCTTGCCCACATATAAGCGGGCTGGCGGCATTGATGAAGGCAGCTCATCCGGAATGGAGTCCAAGTGCTATCAAATCTGCGTTAATGACCACTGCATACACGCAGGACAACACCAACTCATCTCTCCGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGGTCATGGAGCTGGCCATGTTGATCCACACAAAGCCCTCTCCCCAGGTCTTATATACGATATCTCGATCGATGACTACATTGCCTTCCTGTGCTCCTTGGACTATGGGATTGATCATGTTCAGGCAATTGTGAAGCAATCGAATGTAACGTGCTCCCGAAAGTTTGCAGACCCAGGACAACTTAACTACCCTACACTTTCAGTTGTGTTTGGGGGAAAGAGGGTGGTTCAATACACTCGTGAAGTCACGAATGTTGGGGCTGCAGGGTCGGCTTATGAAGTGGCTACTACTGCACCGTTGGCTGTGAATGTGATGGTGAAACCGTCAAGACTTGTTTTCACTAAAGTTGGGGAGAAGAAAATGTACACTGTCACATTTGTGACAAGCGGGGATGCTGCTCAAACCGCAAGATATGGGTTTGGATCGATTGTGTGGAGCAATGATCTACACGTAGTCAGAAGTCCAGTGGCATTCACCTGGACAAGGTTGTGA 1698 51.53 MMGTSEIQEKTSRLETRMDTARTQQARLLGHMWLTRAYLGMPEALPGGWLLKRELQLTKPVGPLVALDLTFLQVWIGQYPTVSMYSHSLWAVALHHYYQDTIAIGAFAAMENGVFVSCSAGNSGPNLASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMNKPVGLVYKEGSNTSSNMCLPGSLDPELIRGKVVVCDRGINARAEKGGVVRDAGGFGMILANTAANGEKLVADSHLLPAVAVGRITGDMIRHYVRSVSKPTAVLSFGGTVVNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALMKAAHPEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWGHGAGHVDPHKALSPGLIYDISIDDYIAFLCSLDYGIDHVQAIVKQSNVTCSRKFADPGQLNYPTLSVVFGGKRVVQYTREVTNVGAAGSAYEVATTAPLAVNVMVKPSRLVFTKVGEKKMYTVTFVTSGDAAQTARYGFGSIVWSNDLHVVRSPVAFTWTRL 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3344758 3347500 + Carg21924-RA Car11g00612 156565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00612 565 ProSiteProfiles Serine proteases, subtilase domain profile. 1 415 - -
Car11g00612 565 Pfam Subtilase family 100 386 IPR000209 GO:0006508|GO:0008236
Car11g00612 565 Pfam PA domain 191 260 IPR003137 -
Car11g00612 565 Pfam Fibronectin type-III domain 462 559 IPR041469 -
Car11g00612 565 ProSitePatterns Serine proteases, subtilase family, serine active site. 345 355 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00612 Car-Chr11:3344758 Car03g00848 Car-Chr3:6850719 0 dispersed
Car10g00692 Car-Chr10:3589429 Car11g00612 Car-Chr11:3344758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00612 - - csv:101209781 837.41