Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00618 ATGGCTTGCGATCCGAACAATGGCGGTGAAATCGGAGCAGAGAATTCTCTCCAATCCATCTGTTACAAACGTGGATCCTTGCGGCTGCTCGATCAGAGGAAGCTTCCTTTGGAAACTCGTTACCTGGACATCAAGGATTCAAAAGATGGATGGCATGCCATAAGGGATATGGTAGTACGCGGGGCGCCTGCCATAGCTATTGCAGCAGCCCTTGCTTTGGCAGCAGAAGTGTACAACTTGGACGCTTTTAATGGGAGTCCCAACGACGCAGCTTCGTTCATTGCGGAGAAATTGGACTACTTAGTCTCCAGTCGGCCAACTGCGGTTAATCTTGGGGACGCTGCTATAAAACTTAAAGAAATTGTATCTCGGGCCGTCGCTATTTCTCCTGATGCCAAGAGTGTCTTTCAAGCATATATTGAGGCTGCTGAAGCGATGCTGGAGGACGACGTTGCTTCAAATAAAGCCATTGGGTCGTATGGAGCAACGTATATCCGTGATCAACAAAAATCATTGGCAAAACTTTCCGTTCTAACGCATTGCAACACGGGCAGTCTAGCAACGGCTGGATATGGTACTGCCCTGGGTGTAATCCGTGCTCTTCACTCTGCTGATGTGTTAGAAAGGGCATACTGTACCGAAACACGACCCTTCAATCAAGGATCTCGACTCACGGCCTACGAGTTGGTCCATGAAAAGATACCTTCTACCCTGATAGCAGATTCGGCTGCAGCCGCCTTGATGAAATCTGGAAGGGTGAATGCTGTTGTAGTTGGGGCCGATCGCGTAGCCGCGAACGGTGACACTGCTAATAAGATTGGAACCTATAGCCTTGCATTGTGTGCAATGCACCACAACATTCCATTCTTTGTGGCTGCACCATTGACTTCCATAGACTTATCCCTTTCATCTGGCGAAGAAATCGTTATCGAGGAAAGGTCCCCCAAAGAGTTGTTGAATGCCCGTGGAGGGCTCGGCGAGCAAGTCGCTGCTTCTGGCATCGATGTCTGGAACCCCGCTTTTGATGTTACTCCTGCTCGTCTGATCTCGGGAATCATTACAGAAAAGGGTGTCATCACGAAGGTGGGTTCTGAAGATTTCAACATAAAGGAGTTTGTTCAAAAGATTGCAGCAGGCACTCTTGCGCAGGTACACTAG 1158 48.96 MACDPNNGGEIGAENSLQSICYKRGSLRLLDQRKLPLETRYLDIKDSKDGWHAIRDMVVRGAPAIAIAAALALAAEVYNLDAFNGSPNDAASFIAEKLDYLVSSRPTAVNLGDAAIKLKEIVSRAVAISPDAKSVFQAYIEAAEAMLEDDVASNKAIGSYGATYIRDQQKSLAKLSVLTHCNTGSLATAGYGTALGVIRALHSADVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKSGRVNAVVVGADRVAANGDTANKIGTYSLALCAMHHNIPFFVAAPLTSIDLSLSSGEEIVIEERSPKELLNARGGLGEQVAASGIDVWNPAFDVTPARLISGIITEKGVITKVGSEDFNIKEFVQKIAAGTLAQVH 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3360313 3364248 - Carg21918-RA Car11g00618 156571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00618 385 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Car11g00618 385 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00618 Car-Chr11:3360313 Car15g00771 Car-Chr15:4365983 7.12E-17 dispersed
Car10g00697 Car-Chr10:3606553 Car11g00618 Car-Chr11:3360313 1.89E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00618 K08963 - csv:101210526 645.195