Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00625 | ATGGCCCTCTCCATTTCTTCCACTGCGCTCTCAACTCTCCCAATCAGCAGAGAATCATCCCACAGCCACCATAAAGCACTTAATTTCCCCGGAAAATTCCCAAAATACAATCTCCGGCGAGGTTCTACTCATCTGAACGCTGCAAAATCCGGCGTATCTAGCGTCTGTGAACCGCTCCCTCCAGATCGACCCCTCTGGTTCCCCGGCAGCACCCCCCCTGAGTGGCTCGACGGCAGCCTTCCAGGCGATTTCGGGTTCGACCCACTTGGATTGGGATCCGACCCAGAGCTCCTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTCGCAGTGGCCGGAATTCTCCTCCCCGAATGGTTCGAGAGCTTAGGACTGATTCAAAATTTCTCCTGGTACGACGCCGGAACGCGAGAATACTTTGCAGACCCGACGACATTGCTGGTGGCTCAATTGGGTCTAATGGGGTGGGTAGAGGGGCGGCGGTGGGCGGACATGGTTAACCCAGGCAGCGTCGACGTGGACCTCAAACTACCTCACAAGAAAAAGCCAACACCGGACGTGGGCTACCCCGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGATCGCCGGAGCCGGTCATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGCTGGCGTTTGTCGGACTGTGGTTTCAGGCTATTTATACAGGGCAGGGTCCGCTGGAGAATCTCGCCGCCCACGTTGCCGATCCCGGCCACTGCAACATCTTCTCGGCATTCAGCTCCGGTGGAATTTGA | 813 | 57.56 | MALSISSTALSTLPISRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGGI | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3410039 | 3411190 | - | Carg27601-RA | Car11g00625 | 156578 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00625 | 270 | Pfam | Chlorophyll A-B binding protein | 72 | 238 | IPR022796 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00812 | Car-Chr1:5493122 | Car11g00625 | Car-Chr11:3410039 | 6.40E-39 | dispersed | |
| Car07g01031 | Car-Chr7:5968924 | Car11g00625 | Car-Chr11:3410039 | 3.83E-41 | dispersed | |
| Car11g00156 | Car-Chr11:866857 | Car11g00625 | Car-Chr11:3410039 | 1.09E-48 | dispersed | |
| Car11g00625 | Car-Chr11:3410039 | Car18g00644 | Car-Chr18:7714155 | 2.38E-64 | dispersed | |
| Car15g00557 | Car-Chr15:3074980 | Car11g00625 | Car-Chr11:3410039 | 4.24E-39 | dispersed | |
| Car11g00625 | Car-Chr11:3410039 | Car10g00187 | Car-Chr10:901163 | 1.14E-65 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00625 | K08908 | - | csv:101211430 | 489.189 |