Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00679 ATGGGTGATCTGGAAACTCAAAGAATTAGAAACATATGTATATTAGCACATGTCGACCATGGCAAAACGACGCTTGCCGACCATCTTATTGCCTCCTCAGGGGGTGGTTTGATCCACCCGAAGATGGCAGGCCGCCTGCGTTTCATGGATTATCTTGATGAGGAACAAAGGAGGGCGATTACTATGAAGAGCTCTTCGATTGGTCTACGGTACAAGGAATACTCCATAAACCTCATTGATTCGCCTGGCCATATGGATTTTTGCAGTGAAGTGTCGACTGCTGCTAGATTGAGTGATGGGGCATTGGTTTTAGTTGATGCTGTGGAGGGTGTGCACATTCAAACCCATGCTGTTTTGCGACAGGCTTGGATTGAGAAGCTTACACCATGTTTGGTTCTTAATAAGATCGATAGATTGATATGTGAGTTGAAGTTGAGTCCTATGGAGGCGTATACTCGTTTGTTGAGGATTGTTCATGAAGTTAATGGGATAATGAGTGCGTACAAGTCTGAGAAATATTTGTCTGATGTGGATTCAATACTTGCAAGCTCTACAGGTGAGGTAAATGATGAGAACCTCGAGTTAATAGAGGATGACGAGGAAGATACATTTCAACCCCAGAAAGGGAATGTTGTGTTTGTGTGTGCGTTAGATGGGTGGGGATTTAGCGTTAATGAGTTCGCTGAATTGTATGCTTCAAAGCTTGGGGCAAATGTATCTGCATTGAAGAAGGCCTTGTGGGGTCCTCGGTATTTTAATGCAAAGACGAAGATGATCGTTGGAAAGAAGGCCTTGGCGGGAGGAAGTAAAGCTCGACCTATGTTTGTTCAATTTGTGCTTGAAAGACTTTGGGAAGTTTATGGGGCTGCTCTAGAAACTGATGGGAATAAGGAGGTGCTTCAAAAGGTTAATAGCACGTTTAATTTGAATATACCAGCTCGAGAACTTTCTAACAAGGATCCAAAGGTGGTTCTTAATGCTATTATGAGTCGTTGGCTTCCTCTTTCAAATGCAATATTATCAATGGTTGTTAACTGTATGCCTGACCCAATTGCTGCACAATCATTTCGAATATCACGGTTGCTTCCAAAGAGGGATGTCATTGATGCTGAAGTCGATGTCAATGTGCTAACTGAGGCAGATCTTGTCAAGAAATCCATTGAAACTTGTGATACGAGGCCTGAGGCTCCATTTGTTGCTTTTGTATCCAAGATGTTTGCAGTGCCAGTTAAAATGCTTCCAAGGAGGGACGATCATGGCGGGACTACTAATATTTCATCTGATGATGGTGGCGATGGTGAATCAGACGAGTGTTTCCTCGCATTTGCAAGGATATTTAGTGGGGTTCTTTATTCTGGACAGAGAGTGTTCGTGCTTTCAGCTTTATATGACCCAACGAAAGGGGAATCGATGCAAAAGCACATTCAGGAGGTTGAGCTGCATTCATTTTATCTAATGATGGGCCAAGGCTTGAAACCAGTGACATCCGTAAAAGCAGGAAACCTTTTAGCAATTCGTGGTCTTAGCCATCACATACTGAAAAGTGCAACTCTTTCATCCACAAGAAATTGCTGGCCTTTCTCAAGTATGGCATTCCAGGTTGCTCCAACTCTGAGGGTTGCACTCGAGCCATCTGATCCTGGAGACATAGGTGCCTTATTGAAAGGTTTAAGGCTTTTAAATCGAGCAGACCCTTTTGTAGAGGTAACTGTTTCATCTCGAGGAGAACATGTACTTGCTGCAGCTGGAGAAGTCCATCTTGAGAGATGCATAAAGGATTTGAAGGAGAGGTTTGCCAGGGTAAGCTTGGAGGTCTCTCCACCTCTTGTATCTTATAAAGAAACAATTGAAGGCGAGGCATCTAGTGTGTCGGATTATTTTAAAGTGTTATCTGAAAGCACAGAGTGTGTCGTTAAGAAAACCCCAAATGGTAGATGTGTTGTCAGAGTGCAGGTACTAAAACTTCCACTTGCTCTAGCTAAAGTACTTGATGAAAATTCTGGTGTTCTGGGCGATATTATTGGCGTCAAGCTGGGGCAAAGCTATAAAAACTTGGAAACAAAGAGATCGACTTTGAGGGAAAATGAGAATCCAGCAGAAACATTAAAGAAACTCATATCGGATGCAGTGTGTAGCGATGTATCGTCGAAGGATGACAAACATAATGCACAGTGGTCAAAGCTTCTTCGACGAATTTGGGCACTTGGACCACAGCAGATTGGTCCTAACATTCTGATTAACCCAGATCCTAAAGTAAATGATTCTGATTGCTCTGTTCTTATTCGGGGTTCATCTCATGCATCACAGAGACTGGGTTTCGTGGACGGTTCTTCAAATGATGATTTGGATGCTGAAACATCGTCGGTAAGTGATGTTGCTTCTGTAGCATCATCAGAAGGAGCTCAGACATTAAGCATGGAAGCAGCATCTCTTGAGAACAGTGTTCTATCTGGGTTTCAGCTTGCTACATCAGCTGGGCCCTTATCTGATGAACCTCTGTGGGGGTTGGCGTTTATTGTCGAGGCTTCTATTTCTTCATTGCCTGGGAATTCAGACGAGTCCGAACCTCCCTTTCAATCAGAGAATAACGCTATCTTTTCTGGGCAAGTTATGGCAGCTGTAAAGGATGCCTGTAGAGCAGCTGTACTTCAAAAGAAACCTCGGCTTGTTGAAGCCATGTACTTCTGTGAATTGAACACTCCCACCGAGTATTTGGGTCCTATGTATGCTGTACTTGCTCGAAGGCGAGCCCGGGTTTTGAAAGAAGAAATGCAGGAAGGTTCACCTTTGTTTACTGTGCACGCATATGTGCCAGTTTCAGAGAGCTTTGGTTTTGCAGATGAGTTAAGGAGGTGGACTTCTGGAGCTGCAAGTGCTCTTCTAGTGCTTAGCCACTGGGAAGAACTATGTGAAGATCCGTTCTTCGTCCCGAAGACGGAAGAAGAAATTGAAGAGTTCGGAGATGGTTCTAGCGTGCTTCCCAACACAGCCAGAAAGCTCATTGATACTGTAAGACGGCGTAAGGGTCTTCCTGTGGAAGAAAAAGTTGTGCAGCATGCTACAAAGCAGAGAACACGTGCTCGAAAAATTCCTGCTTACATGAGAGATTTGTATTCGGCCTGGTCCATCTGGAGTTCGCTCCCTGACATGGCCATCCGGGACGTCGTGAAGCTTGGACGACGACACCCTTACCAGCCTGAAAGTATTAGGCTAGTTCATCTTGTTCGTGAGAAACTGATGGTATGA 3246 44.18 MGDLETQRIRNICILAHVDHGKTTLADHLIASSGGGLIHPKMAGRLRFMDYLDEEQRRAITMKSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSAYKSEKYLSDVDSILASSTGEVNDENLELIEDDEEDTFQPQKGNVVFVCALDGWGFSVNEFAELYASKLGANVSALKKALWGPRYFNAKTKMIVGKKALAGGSKARPMFVQFVLERLWEVYGAALETDGNKEVLQKVNSTFNLNIPARELSNKDPKVVLNAIMSRWLPLSNAILSMVVNCMPDPIAAQSFRISRLLPKRDVIDAEVDVNVLTEADLVKKSIETCDTRPEAPFVAFVSKMFAVPVKMLPRRDDHGGTTNISSDDGGDGESDECFLAFARIFSGVLYSGQRVFVLSALYDPTKGESMQKHIQEVELHSFYLMMGQGLKPVTSVKAGNLLAIRGLSHHILKSATLSSTRNCWPFSSMAFQVAPTLRVALEPSDPGDIGALLKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFARVSLEVSPPLVSYKETIEGEASSVSDYFKVLSESTECVVKKTPNGRCVVRVQVLKLPLALAKVLDENSGVLGDIIGVKLGQSYKNLETKRSTLRENENPAETLKKLISDAVCSDVSSKDDKHNAQWSKLLRRIWALGPQQIGPNILINPDPKVNDSDCSVLIRGSSHASQRLGFVDGSSNDDLDAETSSVSDVASVASSEGAQTLSMEAASLENSVLSGFQLATSAGPLSDEPLWGLAFIVEASISSLPGNSDESEPPFQSENNAIFSGQVMAAVKDACRAAVLQKKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEELCEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQRTRARKIPAYMRDLYSAWSIWSSLPDMAIRDVVKLGRRHPYQPESIRLVHLVREKLMV 1081
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3794943 3798679 + Carg18018-RA Car11g00679 156632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00679 1081 Pfam Elongation factor G C-terminus 889 972 IPR000640 -
Car11g00679 1081 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 7 239 IPR000795 GO:0003924|GO:0005525
Car11g00679 1081 Pfam Elongation factor Tu GTP binding domain 8 346 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01167 Car-Chr5:11118718 Car11g00679 Car-Chr11:3794943 3.36E-110 dispersed
Car11g00679 Car-Chr11:3794943 Car11g01491 Car-Chr11:12029166 1.29E-25 dispersed
Car11g00679 Car-Chr11:3794943 Car08g00127 Car-Chr8:750599 2.57E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00679 K14536 - csv:101220903 1810.04