Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00689 ATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATTGATTTCCTTTCGGCTCCGATTGTGGAAGGAGATGTGGTAGCTCCACCGGCCGATCCTGAAGTCGTGGTGGAAGATGATTATTCTGATGAAGAGATCGACGTCGATGAGCTCGAGAGGAGGATGTGGAAGGATAAGATGCGTCTTAAGCGTCTTAAAGAGCAGAGTAAGGTTAAGGAAGGAGTCGATATTGCGAAGCAGCGACAGTCTCAAGATCAGGCTAGGAGGAAGAAGATGTCGAGGGCGCACGATGGGATCTTGAAGTATATGTTGAAGATTATGGAGGTTTGTAACGCTCAAGGTTTTGTATATGGAATAATTCCCGAGAAGGGAAAACCGGTAACGGGGGCGTCTGATAATCTTAGAGAATGGTGGAAAGATAAGGTCCGATTTGATAGAAATGGACCGGCTGCCATAGCTAAGTACCAAGCGGATAATGCGATCCCGGGACGAAACGACGGGTGTAATTCGATTGGTCCAACCCCACACACCTTGCAGGAACTCCAAGATACTACCCTTGGATCGCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCTCAAAGAAGGTTTCCGTTGGAGAAAGGCGTTCCTCCGCCATGGTGGCCTACTGGAGTCGAGGAATGGTGGCCTCAGCTCGGGTTACCGAAGGACCAAGGTCCCCCACCTTACAAGAAGCCTCACGACTTAAAGAAGGCGTGGAAAGTCGGTGTTTTGACTGCGGTCATCAAACATATGTCCCCTGATATAGCCAAGATCCGCAAGCTCGTTAGGCAATCGAAGTGTTTGCAGGACAAGATGACTGCTAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAAGAGGAGGTCTTGGCTCGGGAGCTTTATCCCGACTCGTGCCCTATCTCTCTGTTTATCATTGGCGCGGGTGGGGAAGTGGGATCACTAGCCGATATAACGATTGTGGAGCGAGTATGA 999 49.05 MMMMFNEMGFCDDIDFLSAPIVEGDVVAPPADPEVVVEDDYSDEEIDVDELERRMWKDKMRLKRLKEQSKVKEGVDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDSCPISLFIIGAGGEVGSLADITIVERV 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3864985 3865983 - Carg18008-RA Car11g00689 156642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00689 332 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Car11g00689 332 Coils Coil 48 68 - -
Car11g00689 332 MobiDBLite consensus disorder prediction 73 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00689 Car-Chr11:3864985 Car15g00509 Car-Chr15:2772226 0 dispersed
Car10g00877 Car-Chr10:5251306 Car11g00689 Car-Chr11:3864985 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4281 PF04873 EIN3 4.90E-130 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00689 K14514 - csv:101206055 610.527