Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00701 | ATGAAAGGACTCATGGAATCGGATGCTGCAATGACAGAAGACTTAATTGCTTATAATATTATTCCATTAGATGCTCCTTCTACGACAAATGCTATTGGGTCCATGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAATATTTCAGTGGCCTTCCAAAGTTGCCTTCAGAATTTTGTTTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGAAAGACAATGTGTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAGTCTCGCCTTTGTATTCCTGAAGAAAATGAACCAAAATTGGATGAAGCTGCTGTGGAGGGTGTATTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGATGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTTCTTATATGGGGCGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTCCGGGAAATGGATGTGATATTGAGGCATGAGATTGCGCAGCCAGCCAAGAGTTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTTTCCTCTTTATGAGGTCATGGCCGCGGTATGTTTCTTGTCTCACCTAAAGCTTTTAAAGAAAGAGTAG | 711 | 40.51 | MKGLMESDAAMTEDLIAYNIIPLDAPSTTNAIGSMAEVQAAVSALKYFSGLPKLPSEFCFPETRSPDILDFLHFIFGFQKDNVSNQREHVVHLLANEQSRLCIPEENEPKLDEAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSDVSKEKKLLFISLYFLIWGEAANVRFLPECLCYIFHHMVREMDVILRHEIAQPAKSCESKDGVSFLDQVIFPLYEVMAAVCFLSHLKLLKKE | 236 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3988840 | 3994369 | - | Carg17996-RA | Car11g00701 | 156654 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00701 | 236 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 151 | 222 | IPR026899 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g00701 | Car-Chr11:3988840 | Car11g00044 | Car-Chr11:227521 | 3.89E-79 | dispersed | |
| Car11g00697 | Car-Chr11:3938487 | Car11g00701 | Car-Chr11:3988840 | 5.42E-160 | proximal | |
| Car11g00701 | Car-Chr11:3988840 | Car11g00702 | Car-Chr11:3998099 | 2.65E-50 | tandem | |
| Car11g00701 | Car-Chr11:3988840 | Car17g00880 | Car-Chr17:7359194 | 3.34E-13 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00701 | K11000 | - | csv:101216435 | 407.912 |