Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00714 ATGGAGAATCTTATGATGGTCGATGATGCGTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATCGAACCCGAGGATTTGGAGAAGCGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAACGACAGAAGATTGCGGCACAACAGGCTGCGGAGAAGCAGAAGCCAAAGCATACGTCTGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTACATGTTAAAACTTATGGAAGTATGTAAAGCTCGGGGATTCGTATATGGCATTATTCCAGAAAAGGGGAAACCAGTTAGTGGTGCTTCTGATAACATTCGAGCGTGGTGGAAAGAAAAGGTTAAATTTGATAAGAACGGACCGGCTGCCATAGCCAAGTATGAAGCAGAATGTCTTGCCAAGGGAGAGACAGATGGAAATGGAAATAGGAATGCGCAGAGCGTTCTTCAAGATCTTCAGGATGCGACACTCGGGTCTCTTTTGTCTTCGTTGATGCAACATTGTGATCCCCCTCAACGGAAGTACCCTTTAGAAAAAGGGGTCCCTCCACCTTGGTGGCCCTCTGGAAATGAAGCTTGGTGGGAAAAACTCGGGCTATCTCATGGCGTTAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAGGTCGGGGTCTTAACGGCTGTGATAAAACATATGTCTCCTGATATTGCAAAGATAAGGAGGCATGTACGTCAGTCGAAGTGCTTACAAGACAAGATGACAGCAAAGGAGAGTGCAATATGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGACAACCGAGCAGCGATAATGGGGCATCTGAAATTACAGAGACACCGGTTGGTGGTCGTGGTGGAAAGCAAGCTGCCATTAGCAGTGACAGTGACTATGATGTTGATCTTGCAGATGATGGTGGGTCAGTTTCTCGTAAAGAGGACAGGAGAAATCGATTGGTGGATGCCGAGCCATCCAGTAATCTACGCAACAATGCTCCTCAACCTGCTCAAGTAAAGGAGCAAGGTGAACAGCATCGGAGAAAAAGACATCGTGGTGGCAGGTCAAAACCTGCCGATGAAACACCGAACGAGGAAGAATTAAACGTCGAGCCAAGAAATACTCATCTAGATATAAATCATTCTGATGTACCATTAGGTAGACATGAAATTCCAGGAAACCTACCAGAAAAGGATACTGTCACAGCTTTGAGGCCACTGGAGAAAGATATGGATGTCCGATCAGACGTACCAGCTCCCCAGTTCGACATGTTCTCCACGAGTGCCACGGATAATATCAACATAATTTCCACACAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCCGTAATGCAGAATGTCGACATGCAACAGGAAAGCGCTTACGATATTTATAATCCACCAGTGGAATATAATTCCAACTATGATGTACAGCATCCTCAATTTGTTAACGAGCCTCAATTGAGATCGGAGGAAGGAGCACACGTGCCAACACAAAATAGAAACGACGAGACGATTGGAGGAGATTTCAACTATATAAAAGAAACGTTCGACAACAAACAATATAGGCCTGTTGATTCACAGTTTGGATCACCAATCAATAGTCTCTCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTTGGAATCGACGTTTCAAGCTCGTTCGATGACTTCTTGGGATTGACTGCAAGAACGCAGCTCATCGACGTCTACGCTCAACGGGGTTCTTTTACCCGATCAGCTGAGAAACGTTCCTGTTTGGTCTTATCTAATGCCATCAGGACTGTAGGTCATATGATTTTGCAAAATATGACTGTCAAAGGTGTGTGCAGTTGTACCAAAGCAACTGCCGGGGTTGGGGTCGGGGTCAGTGTCGGGGCCGGAACTGATTTCATACCATTTGCATCTGGTAACATCTATCATCTCCCTTACTTCTAA 2022 44.81 MENLMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIEPEDLEKRMWKDRIKLKRIKERQKIAAQQAAEKQKPKHTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGETDGNGNRNAQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEAWWEKLGLSHGVSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASEITETPVGGRGGKQAAISSDSDYDVDLADDGGSVSRKEDRRNRLVDAEPSSNLRNNAPQPAQVKEQGEQHRRKRHRGGRSKPADETPNEEELNVEPRNTHLDINHSDVPLGRHEIPGNLPEKDTVTALRPLEKDMDVRSDVPAPQFDMFSTSATDNINIISTQSMYVDGRPLLYPVMQNVDMQQESAYDIYNPPVEYNSNYDVQHPQFVNEPQLRSEEGAHVPTQNRNDETIGGDFNYIKETFDNKQYRPVDSQFGSPINSLSLDYGAFNSPFHLGIDVSSSFDDFLGLTARTQLIDVYAQRGSFTRSAEKRSCLVLSNAIRTVGHMILQNMTVKGVCSCTKATAGVGVGVSVGAGTDFIPFASGNIYHLPYF 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4083376 4085981 + Carg17983-RA Car11g00714 156667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00714 673 MobiDBLite consensus disorder prediction 379 393 - -
Car11g00714 673 MobiDBLite consensus disorder prediction 71 85 - -
Car11g00714 673 Pfam Ethylene insensitive 3 40 287 IPR006957 GO:0005634
Car11g00714 673 MobiDBLite consensus disorder prediction 62 85 - -
Car11g00714 673 MobiDBLite consensus disorder prediction 348 363 - -
Car11g00714 673 MobiDBLite consensus disorder prediction 289 393 - -
Car11g00714 673 MobiDBLite consensus disorder prediction 329 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00714 Car-Chr11:4083376 Car16g00716 Car-Chr16:4581370 6.60E-97 dispersed
Car11g00714 Car-Chr11:4083376 Car15g00509 Car-Chr15:2772226 8.87E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4284 PF04873 EIN3 1.60E-126 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00714 K14514 - csv:101210347 973.385