Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00741 ATGTTTCAAGATGAAGGCACATCCTCCATAACTTCTTCCCCTCTCCAGTTCTTCACAATGATGTCTCTTTCACCTAAACTGGGCTCTCCATATCCATGGCTTAGAGAGCTAAAATCGGAGGAGAGGGGCTTGTATTTGATCCATTTGTTGCTTACTTGTGCTAACCATGTGGCTGTTGGTAGTCTTGACAATGCTAATCTTGCTCTTGATCAGATATCCCATCTTGCTTCTGCTGATGGCGATACAATGCAGCGGATAGCAGCGTATTTCGCCGAGGCTCTTGCCAATCGAATCCTTAAAACTTGGCCTGGCCTTTATAAGGCCTTTAACTCCACAAAGATACCTGTGGTTTCAGAGGAGATTCTTGTTAAAAAGCTGTTTTTTGAGGTGTTTCCATTCCTTAAGGTGGCTATTGTGCTTACTAATCAGGCTATTGTTGAAGCCATGGAAGGGGAAAAGATGATTCATATCATTGATCTCAATGCCAATGAAACTGCTCAATGGCTTGCACTTTTGCAGGTTTTGAGTGTCAGGCCTGAAGGGCCTCCCCATTTGAGAATCACTGGGGTTCATCAACAGAAACAGGTTCTGGATCGAATGGCTCGTCGGCTAACTGAAGAAGCTGAAAAGTTTGATATACCGTTTCGATTCGATTCGGTCGTCTGCCGATTAGAGGATCTTGATATGGAAAAGCTTCGTGTGAAAACAGGGGAGGCTCTGGCTATCAGCTCAGTTCTTCAGTTGCATACCCTTTTGGCAGCTGATAATGAAGTCCTGCAAAAGTCATCTCCATTAGCAGGAAAGAGTGCCAATGGAGTTCATTACTCGAGATACCAGCACCCGAACCAAACCAACTTGAGTGAGTTACTCGAAAAGGATTCGGTTAACGGGTGCAGTCCGAGTCCCGATTCGGTATCTTCATCAGCTTTATCTCAAGCCAACGTGACGAAGATCGACAGCTTCTTGAATGGATTGTGGAGTTTGACGCCGAAGGTGATGGTCGTAACCGAACAAGATTCTAACCATAATGGTGCAACACTTATGGAGAGATCACTAGAGGCTCTCCACACATATGCAGCAATCTTTGATTGCTTGGAATCTAATATGTCAAGAACATCCCTAGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGGGAAGAGATTAAGAACATTATAGCTTGTGAGGGAGGTGAAAGGAAGGAACGACACGAGAAGTGTGAGAAATGGAGTCAACGGTTCGATCTCGCGGGGTTCAGGCATGTGCCTTTGAGTTATTATGGCATGCTGCAGGCAAGGAGCCTGCTGCAGGGGTATGGTTGTGATGGTTATAGGCTGAAGGAAGAGAATGGTTGTGTTATGATTTGTTGGCAAGATCGTCCGTTGTTCTCGGTATCGGCTTGGAGGTGTTGTAAGTAG 1416 45.2 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDNANLALDQISHLASADGDTMQRIAAYFAEALANRILKTWPGLYKAFNSTKIPVVSEEILVKKLFFEVFPFLKVAIVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSVRPEGPPHLRITGVHQQKQVLDRMARRLTEEAEKFDIPFRFDSVVCRLEDLDMEKLRVKTGEALAISSVLQLHTLLAADNEVLQKSSPLAGKSANGVHYSRYQHPNQTNLSELLEKDSVNGCSPSPDSVSSSALSQANVTKIDSFLNGLWSLTPKVMVVTEQDSNHNGATLMERSLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGGERKERHEKCEKWSQRFDLAGFRHVPLSYYGMLQARSLLQGYGCDGYRLKEENGCVMICWQDRPLFSVSAWRCCK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4314453 4315868 - Carg25432-RA Car11g00741 156694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00741 471 Pfam GRAS domain family 46 468 IPR005202 -
Car11g00741 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00741 Car-Chr11:4314453 Car04g02872 Car-Chr4:21709645 5.33E-80 dispersed
Car18g00804 Car-Chr18:9120096 Car11g00741 Car-Chr11:4314453 0 transposed
Car10g00825 Car-Chr10:4678782 Car11g00741 Car-Chr11:4314453 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4288 PF03514 GRAS 8.10E-139 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00741 - - csv:101215435 832.402